Information for 13-ACTAAAGCAA (Motif 25)

C G T A A G T C A C G T C G T A C G T A C G T A A C T G A G T C C G T A C G T A
Reverse Opposite:
A C G T A C G T A C T G A G T C A C G T A C G T A C G T C G T A A C T G A C G T
p-value:1e-5
log p-value:-1.298e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.48%
Number of Background Sequences with motif5.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets65.8 +/- 28.5bp
Average Position of motif in Background72.4 +/- 23.5bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0026.1_Duxbl/Jaspar

Match Rank:1
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--ACTAAAGCAA-----
CGACCCAATCAACGGTG
 A C G T A C G T C G T A A G T C A C G T C G T A C G T A C G T A A C T G A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A G T C C T A G C T G A A G T C A G T C A G T C G T C A G T C A A G C T A G T C C G T A C T G A A G T C T A C G T C A G G C A T T A C G

PB0123.1_Foxl1_2/Jaspar

Match Rank:2
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--ACTAAAGCAA----
ATATCAAAACAAAACA
 A C G T A C G T C G T A A G T C A C G T C G T A C G T A C G T A A C T G A G T C C G T A C G T A A C G T A C G T A C G T A C G T
G C T A C G A T C G T A C G A T G A T C G C T A G C T A G T C A C G T A A G T C C G T A C G T A G T C A C G T A G T A C G T C A

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:3
Score:0.57
Offset:1
Orientation:forward strand
Alignment:ACTAAAGCAA-
-MTGATGCAAT
 C G T A A G T C A C G T C G T A C G T A C G T A A C T G A G T C C G T A C G T A A C G T
A C G T T G C A A G C T C A T G C G T A A G C T A C T G G A T C G T C A C G T A A G C T

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:4
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:ACTAAAGCAA-
-ATGATGCAAT
 C G T A A G T C A C G T C G T A C G T A C G T A A C T G A G T C C G T A C G T A A C G T
A C G T T G C A A G C T A C T G C G T A A G C T C A T G G A T C T G C A C G T A A G C T

ATF4/MA0833.1/Jaspar

Match Rank:5
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-ACTAAAGCAA--
GGATGATGCAATA
 A C G T C G T A A G T C A C G T C G T A C G T A C G T A A C T G A G T C C G T A C G T A A C G T A C G T
C T A G C A T G T G C A A C G T C T A G C G T A A G C T C A T G G A T C G T C A G C T A A G C T T G C A

MF0006.1_bZIP_cEBP-like_subclass/Jaspar

Match Rank:6
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:ACTAAAGCAA-
--TTATGCAAT
 C G T A A G T C A C G T C G T A C G T A C G T A A C T G A G T C C G T A C G T A A C G T
A C G T A C G T C G A T C A G T C T G A A G C T C T A G G A T C T G C A C T G A A G C T

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:7
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---ACTAAAGCAA
NGYCATAAAWCH-
 A C G T A C G T A C G T C G T A A G T C A C G T C G T A C G T A C G T A A C T G A G T C C G T A C G T A
T A C G T C A G G A T C G T A C T C G A G A C T G C T A G C T A G C T A C G T A G A T C G T C A A C G T

IRF7/MA0772.1/Jaspar

Match Rank:8
Score:0.55
Offset:0
Orientation:forward strand
Alignment:ACTAAAGCAA----
ACGAAAGCGAAAGT
 C G T A A G T C A C G T C G T A C G T A C G T A A C T G A G T C C G T A C G T A A C G T A C G T A C G T A C G T
G T C A T G A C A C T G T G C A C G T A G T C A T C A G G A T C C T A G G T C A T C G A G C T A T C A G G C A T

Arid3a/MA0151.1/Jaspar

Match Rank:9
Score:0.55
Offset:0
Orientation:forward strand
Alignment:ACTAAAGCAA
ATTAAA----
 C G T A A G T C A C G T C G T A C G T A C G T A A C T G A G T C C G T A C G T A
C G T A A C G T G A C T C G T A C G T A C G T A A C G T A C G T A C G T A C G T

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:10
Score:0.55
Offset:-7
Orientation:forward strand
Alignment:-------ACTAAAGCAA
CTTAACCACTTAAGGAT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C A C G T C G T A C G T A C G T A A C T G A G T C C G T A C G T A
G T A C G C A T C G A T T C G A C T G A T A G C A G T C C G T A G T A C A C G T A G C T C G T A C G T A T A C G A C T G T C G A A C G T