Information for 8-CAAGCAAGCACGCACG (Motif 24)

T G A C C G T A G T C A C T A G A G T C C G T A C G T A C T A G A T G C C G T A A T G C T C A G A G T C C G T A A G T C C A T G
Reverse Opposite:
G A T C T A C G C G A T A C T G A G T C T A C G A C G T A T C G A G T C G A C T A C G T C T A G A G T C A C G T A C G T A C T G
p-value:1e-6
log p-value:-1.506e+01
Information Content per bp:1.702
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.97%
Number of Background Sequences with motif35.2
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets56.4 +/- 24.5bp
Average Position of motif in Background42.4 +/- 33.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0130.1_Gm397_2/Jaspar

Match Rank:1
Score:0.65
Offset:3
Orientation:forward strand
Alignment:CAAGCAAGCACGCACG---
---AGCGGCACACACGCAA
 T G A C C G T A G T C A C T A G A G T C C G T A C G T A C T A G A T G C C G T A A T G C T C A G A G T C C G T A A G T C C A T G A C G T A C G T A C G T
A C G T A C G T A C G T C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:2
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:CAAGCAAGCACGCACG--
---SCAGYCADGCATGAC
 T G A C C G T A G T C A C T A G A G T C C G T A C G T A C T A G A T G C C G T A A T G C T C A G A G T C C G T A A G T C C A T G A C G T A C G T
A C G T A C G T A C G T A T C G G T A C C G T A A T C G A G C T A T G C C G T A C T A G A T C G A G T C T C G A C A G T T C A G T C G A T G A C

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:3
Score:0.57
Offset:5
Orientation:forward strand
Alignment:CAAGCAAGCACGCACG
-----TBGCACGCAA-
 T G A C C G T A G T C A C T A G A G T C C G T A C G T A C T A G A T G C C G T A A T G C T C A G A G T C C G T A A G T C C A T G
A C G T A C G T A C G T A C G T A C G T G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A A C G T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:4
Score:0.56
Offset:8
Orientation:reverse strand
Alignment:CAAGCAAGCACGCACG
--------CACGCA--
 T G A C C G T A G T C A C T A G A G T C C G T A C G T A C T A G A T G C C G T A A T G C T C A G A G T C C G T A A G T C C A T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A G T A C C T A G G T A C C T G A A C G T A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:5
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CAAGCAAGCACGCACG
AAGGCAAGTGT-----
 T G A C C G T A G T C A C T A G A G T C C G T A C G T A C T A G A T G C C G T A A T G C T C A G A G T C C G T A A G T C C A T G
T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T A C G T A C G T A C G T A C G T A C G T

PB0208.1_Zscan4_2/Jaspar

Match Rank:6
Score:0.55
Offset:3
Orientation:forward strand
Alignment:CAAGCAAGCACGCACG---
---CGAAGCACACAAAATA
 T G A C C G T A G T C A C T A G A G T C C G T A C G T A C T A G A T G C C G T A A T G C T C A G A G T C C G T A A G T C C A T G A C G T A C G T A C G T
A C G T A C G T A C G T G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

MF0005.1_Forkhead_class/Jaspar

Match Rank:7
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CAAGCAAGCACGCACG
-AAATAAACA------
 T G A C C G T A G T C A C T A G A G T C C G T A C G T A C T A G A T G C C G T A A T G C T C A G A G T C C G T A A G T C C A T G
A C G T T C G A G T C A T C G A G A C T G T C A C T G A T C G A G A T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T

FOXP3/MA0850.1/Jaspar

Match Rank:8
Score:0.53
Offset:3
Orientation:forward strand
Alignment:CAAGCAAGCACGCACG
---GTAAACA------
 T G A C C G T A G T C A C T A G A G T C C G T A C G T A C T A G A T G C C G T A A T G C T C A G A G T C C G T A A G T C C A T G
A C G T A C G T A C G T C T A G G A C T C G T A C T G A T C G A A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:9
Score:0.52
Offset:0
Orientation:forward strand
Alignment:CAAGCAAGCACGCACG
AAAGTAAACA------
 T G A C C G T A G T C A C T A G A G T C C G T A C G T A C T A G A T G C C G T A A T G C T C A G A G T C C G T A A G T C C A T G
G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:10
Score:0.52
Offset:0
Orientation:forward strand
Alignment:CAAGCAAGCACGCACG
AAAGTAAACA------
 T G A C C G T A G T C A C T A G A G T C C G T A C G T A C T A G A T G C C G T A A T G C T C A G A G T C C G T A A G T C C A T G
G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T