Information for 7-AAAACCARGATAAATA (Motif 21)

C G T A C G T A C G T A C G T A A G T C A G T C C G T A C T A G C A T G C G T A A C G T C G T A C G T A C G T A C G A T C G T A
Reverse Opposite:
A C G T C G T A A C G T A C G T A C G T C G T A A C G T G A T C A G C T A C G T A C T G A C T G C G A T A C G T A C G T A C G T
p-value:1e-8
log p-value:-1.936e+01
Information Content per bp:1.900
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.48%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets48.2 +/- 16.1bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:AAAACCARGATAAATA--
--TGCCAAAATAAACANN
 C G T A C G T A C G T A C G T A A G T C A G T C C G T A C T A G C A T G C G T A A C G T C G T A C G T A C G T A C G A T C G T A A C G T A C G T
A C G T A C G T C G A T A C T G T A G C G T A C C G T A C T G A C T G A C T G A G A C T G T C A G T C A C T G A A G T C C G T A C T G A G C T A

MF0005.1_Forkhead_class/Jaspar

Match Rank:2
Score:0.58
Offset:7
Orientation:reverse strand
Alignment:AAAACCARGATAAATA
-------AAATAAACA
 C G T A C G T A C G T A C G T A A G T C A G T C C G T A C T A G C A T G C G T A A C G T C G T A C G T A C G T A C G A T C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A G T C A T C G A G A C T G T C A C T G A T C G A G A T C C G T A

Foxa2/MA0047.2/Jaspar

Match Rank:3
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:AAAACCARGATAAATA
----NCTAAGTAAACA
 C G T A C G T A C G T A C G T A A G T C A G T C C G T A C T A G C A T G C G T A A C G T C G T A C G T A C G T A C G A T C G T A
A C G T A C G T A C G T A C G T T A G C G T A C G C A T T C G A C G T A C T A G A G C T G T C A T G C A C G T A A G T C C G T A

Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer

Match Rank:4
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:AAAACCARGATAAATA---
----NCWRWGTAAACANSV
 C G T A C G T A C G T A C G T A A G T C A G T C C G T A C T A G C A T G C G T A A C G T C G T A C G T A C G T A C G A T C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G A C G A T C G C A T C T G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C G T A A T C G T C A G

FOXL1/MA0033.2/Jaspar

Match Rank:5
Score:0.57
Offset:9
Orientation:forward strand
Alignment:AAAACCARGATAAATA
---------GTAAACA
 C G T A C G T A C G T A C G T A A G T C A G T C C G T A C T A G C A T G C G T A A C G T C G T A C G T A C G T A C G A T C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G G A C T T G C A G T C A T G C A A G T C G T C A

PH0057.1_Hoxb13/Jaspar

Match Rank:6
Score:0.57
Offset:1
Orientation:forward strand
Alignment:AAAACCARGATAAATA-
-AACCCAATAAAATTCG
 C G T A C G T A C G T A C G T A A G T C A G T C C G T A C T A G C A T G C G T A A C G T C G T A C G T A C G T A C G A T C G T A A C G T
A C G T T G C A C T G A G T A C A G T C G A T C G C T A C T G A A G C T C G T A C G T A G C T A T G C A G C A T G C A T G A T C T A C G

FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer

Match Rank:7
Score:0.56
Offset:6
Orientation:forward strand
Alignment:AAAACCARGATAAATA--
------WWTRTAAACAVG
 C G T A C G T A C G T A C G T A A G T C A G T C C G T A C T A G C A T G C G T A A C G T C G T A C G T A C G T A C G A T C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A G C T A C G A T C T A G A C G T G T C A C G T A C G T A A G T C C G T A T G C A T A C G

Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer

Match Rank:8
Score:0.56
Offset:5
Orientation:forward strand
Alignment:AAAACCARGATAAATA-
-----WWATRTAAACAN
 C G T A C G T A C G T A C G T A A G T C A G T C C G T A C T A G C A T G C G T A A C G T C G T A C G T A C G T A C G A T C G T A A C G T
A C G T A C G T A C G T A C G T A C G T G C A T G C A T C T G A A C G T C T G A A C G T C G T A C G T A C G T A A G T C G T C A G T C A

POL012.1_TATA-Box/Jaspar

Match Rank:9
Score:0.56
Offset:7
Orientation:forward strand
Alignment:AAAACCARGATAAATA------
-------GTATAAAAGGCGGGG
 C G T A C G T A C G T A C G T A A G T C A G T C C G T A C T A G C A T G C G T A A C G T C G T A C G T A C G T A C G A T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

TBP/MA0108.2/Jaspar

Match Rank:10
Score:0.56
Offset:7
Orientation:forward strand
Alignment:AAAACCARGATAAATA------
-------GTATAAAAGGCGGGG
 C G T A C G T A C G T A C G T A A G T C A G T C C G T A C T A G C A T G C G T A A C G T C G T A C G T A C G T A C G A T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G