Information for 6-CACACACACAKGRAAC (Motif 15)

A G T C G T C A G T A C C G T A A G T C C G T A A G T C C T G A T G A C G T C A C A G T T A C G T C G A G T C A C T G A G T A C
Reverse Opposite:
C A T G A G C T C A G T A G C T A T G C G T C A A C G T A C T G A G C T A C T G C G A T C T A G G C A T A C T G A C G T C T A G
p-value:1e-11
log p-value:-2.581e+01
Information Content per bp:1.716
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.33%
Number of Background Sequences with motif28.5
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets53.9 +/- 23.0bp
Average Position of motif in Background50.0 +/- 36.4bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CACACACACAKGRAAC
CRCCCACGCA------
 A G T C G T C A G T A C C G T A A G T C C G T A A G T C C T G A T G A C G T C A C A G T T A C G T C G A G T C A C T G A G T A C
G A T C C T G A A G T C T G A C A G T C G T C A A G T C C T A G A G T C G T C A A C G T A C G T A C G T A C G T A C G T A C G T

PB0130.1_Gm397_2/Jaspar

Match Rank:2
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----CACACACACAKGRAAC
AGCGGCACACACGCAA-----
 A C G T A C G T A C G T A C G T A C G T A G T C G T C A G T A C C G T A A G T C C G T A A G T C C T G A T G A C G T C A C A G T T A C G T C G A G T C A C T G A G T A C
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A A C G T A C G T A C G T A C G T A C G T

PB0208.1_Zscan4_2/Jaspar

Match Rank:3
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CACACACACAKGRAAC
CGAAGCACACAAAATA-
 A C G T A G T C G T C A G T A C C G T A A G T C C G T A A G T C C T G A T G A C G T C A C A G T T A C G T C G A G T C A C T G A G T A C
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A A C G T

KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---CACACACACAKGRAAC
GGACACACCCCC-------
 A C G T A C G T A C G T A G T C G T C A G T A C C G T A A G T C C G T A A G T C C T G A T G A C G T C A C A G T T A C G T C G A G T C A C T G A G T A C
T C A G T A C G G T C A A G T C G T C A A G T C C T G A A G T C G T A C G A T C G T A C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer

Match Rank:5
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--CACACACACAKGRAAC
GCCACRCCCACY------
 A C G T A C G T A G T C G T C A G T A C C G T A A G T C C G T A A G T C C T G A T G A C G T C A C A G T T A C G T C G A G T C A C T G A G T A C
T C A G T G A C G T A C T G C A G T A C C T A G G T A C A T G C A G T C G T C A A G T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:6
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:CACACACACAKGRAAC
----CACGCA------
 A G T C G T C A G T A C C G T A A G T C C G T A A G T C C T G A T G A C G T C A C A G T T A C G T C G A G T C A C T G A G T A C
A C G T A C G T A C G T A C G T A G T C C G T A G T A C C T A G G T A C C T G A A C G T A C G T A C G T A C G T A C G T A C G T

PB0166.1_Sox12_2/Jaspar

Match Rank:7
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-CACACACACAKGRAAC
AAACAGACAAAGGAAT-
 A C G T A G T C G T C A G T A C C G T A A G T C C G T A A G T C C T G A T G A C G T C A C A G T T A C G T C G A G T C A C T G A G T A C
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T A C G T

Twist2/MA0633.1/Jaspar

Match Rank:8
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:CACACACACAKGRAAC
----NACATATGGN--
 A G T C G T C A G T A C C G T A A G T C C G T A A G T C C T G A T G A C G T C A C A G T T A C G T C G A G T C A C T G A G T A C
A C G T A C G T A C G T A C G T G T C A G T C A A G T C C G T A A G C T C T G A A C G T A C T G A C T G A G C T A C G T A C G T

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--CACACACACAKGRAAC
GCCACACCCA--------
 A C G T A C G T A G T C G T C A G T A C C G T A A G T C C G T A A G T C C T G A T G A C G T C A C A G T T A C G T C G A G T C A C T G A G T A C
C T A G G T A C A G T C T G C A A G T C C T G A A G T C A G T C A G T C G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:10
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--CACACACACAKGRAAC
YCCGCCCACGCN------
 A C G T A C G T A G T C G T C A G T A C C G T A A G T C C G T A A G T C C T G A T G A C G T C A C A G T T A C G T C G A G T C A C T G A G T A C
G A T C G T A C G A T C C T A G A G T C A G T C A G T C G T C A A G T C C T A G A T G C T C G A A C G T A C G T A C G T A C G T A C G T A C G T