Information for 10-CACCMTKGTGKAK (Motif 5)

A G T C C T G A A T G C A G T C G T A C A C G T A C G T A C T G A C G T A C T G A C T G C G T A A C T G
Reverse Opposite:
G T A C A C G T G T A C A G T C C G T A A G T C G T C A C G T A A C T G A C T G A T C G A G C T A C T G
p-value:1e-12
log p-value:-2.811e+01
Information Content per bp:1.874
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets68.0 +/- 23.8bp
Average Position of motif in Background71.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0168.1_Sox14_2/Jaspar

Match Rank:1
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CACCMTKGTGKAK-
NNNCCATTGTGTNAN
 A C G T A G T C C T G A A T G C A G T C G T A C A C G T A C G T A C T G A C G T A C T G A C T G C G T A A C T G A C G T
A T C G T G A C A C T G A G T C G A T C C G T A A C G T A C G T T A C G G C A T A T C G A G C T T C A G T G C A T C A G

Sox2/MA0143.3/Jaspar

Match Rank:2
Score:0.64
Offset:2
Orientation:forward strand
Alignment:CACCMTKGTGKAK
--CCTTTGTT---
 A G T C C T G A A T G C A G T C G T A C A C G T A C G T A C T G A C G T A C T G A C T G C G T A A C T G
A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A C G T A C G T A C G T

PB0132.1_Hbp1_2/Jaspar

Match Rank:3
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---CACCMTKGTGKAK-
TGTTCCCATTGTGTACT
 A C G T A C G T A C G T A G T C C T G A A T G C A G T C G T A C A C G T A C G T A C T G A C G T A C T G A C T G C G T A A C T G A C G T
C G A T C T A G C A G T A G C T A G T C G A T C G A T C C G T A G A C T C G A T C A T G C A G T T C A G G A C T C T G A A T G C G C A T

ZNF354C/MA0130.1/Jaspar

Match Rank:4
Score:0.62
Offset:7
Orientation:reverse strand
Alignment:CACCMTKGTGKAK
-------GTGGAT
 A G T C C T G A A T G C A G T C G T A C A C G T A C G T A C T G A C G T A C T G A C T G C G T A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A C G T A C T G A C T G C G T A A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:5
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CACCMTKGTGKAK
--CCWTTGTY---
 A G T C C T G A A T G C A G T C G T A C A C G T A C G T A C T G A C G T A C T G A C T G C G T A A C T G
A C G T A C G T A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T A C G T A C G T A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.58
Offset:-8
Orientation:forward strand
Alignment:--------CACCMTKGTGKAK
CNNBRGCGCCCCCTGSTGGC-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C T G A A T G C A G T C G T A C A C G T A C G T A C T G A C G T A C T G A C T G C G T A A C T G
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C A C G T

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:7
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CACCMTKGTGKAK
-NCCATTGTTY--
 A G T C C T G A A T G C A G T C G T A C A C G T A C G T A C T G A C G T A C T G A C T G C G T A A C T G
A C G T C T A G A G T C G A T C G C T A C G A T A C G T A T C G A C G T A G C T G A C T A C G T A C G T

SOX10/MA0442.1/Jaspar

Match Rank:8
Score:0.57
Offset:3
Orientation:forward strand
Alignment:CACCMTKGTGKAK
---CTTTGT----
 A G T C C T G A A T G C A G T C G T A C A C G T A C G T A C T G A C G T A C T G A C T G C G T A A C T G
A C G T A C G T A C G T A G T C C G A T A C G T A C G T A T C G A C G T A C G T A C G T A C G T A C G T

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.57
Offset:4
Orientation:forward strand
Alignment:CACCMTKGTGKAK---
----NNTGTGGATTSS
 A G T C C T G A A T G C A G T C G T A C A C G T A C G T A C T G A C G T A C T G A C T G C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G G A C T G C A T A C T G A G C T A C T G A C T G C G T A G C A T A G C T A T C G T A C G

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:10
Score:0.57
Offset:2
Orientation:forward strand
Alignment:CACCMTKGTGKAK
--CCWTTGTYYB-
 A G T C C T G A A T G C A G T C G T A C A C G T A C G T A C T G A C G T A C T G A C T G C G T A A C T G
A C G T A C G T A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G A C G T