Information for 15-CCCHCTGCTGAAA (Motif 14)

G T A C A G T C A G T C G C T A A G T C C G A T A T C G A G T C C G A T A C T G C G T A G T C A C G T A
Reverse Opposite:
A C G T A C G T C G A T A G T C C G T A A C T G A T G C C G T A C T A G C A G T A C T G A C T G A C T G
p-value:1e-9
log p-value:-2.193e+01
Information Content per bp:1.843
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.95%
Number of Background Sequences with motif9.3
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets44.4 +/- 26.8bp
Average Position of motif in Background45.6 +/- 15.3bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CCCHCTGCTGAAA
CCCCCTGCTGTG-
 G T A C A G T C A G T C G C T A A G T C C G A T A T C G A G T C C G A T A C T G C G T A G T C A C G T A
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:2
Score:0.63
Offset:3
Orientation:forward strand
Alignment:CCCHCTGCTGAAA--
---GGTGYTGACAGS
 G T A C A G T C A G T C G C T A A G T C C G A T A T C G A G T C C G A T A C T G C G T A G T C A C G T A A C G T A C G T
A C G T A C G T A C G T T C A G A T C G G A C T A C T G G A C T C A G T C T A G C G T A G T A C C G T A C T A G A T C G

ZIC1/MA0696.1/Jaspar

Match Rank:3
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CCCHCTGCTGAAA
GACCCCCCGCTGTG-
 A C G T A C G T G T A C A G T C A G T C G C T A A G T C C G A T A T C G A G T C C G A T A C T G C G T A G T C A C G T A
A C T G T C G A G T A C G T A C G T A C A G T C G T A C G A T C T C A G A G T C A C G T T C A G G A C T A C T G A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:4
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CCCHCTGCTGAAA
GGCCYCCTGCTGDGH
 A C G T A C G T G T A C A G T C A G T C G C T A A G T C C G A T A T C G A G T C C G A T A C T G C G T A G T C A C G T A
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

ZIC3/MA0697.1/Jaspar

Match Rank:5
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CCCHCTGCTGAAA
GACCCCCCGCTGCGC
 A C G T A C G T G T A C A G T C A G T C G C T A A G T C C G A T A T C G A G T C C G A T A C T G C G T A G T C A C G T A
A C T G T C G A G T A C G A T C G T A C A G T C A G T C A G T C T C A G A G T C A C G T C A T G G A T C C A T G G T A C

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:6
Score:0.60
Offset:5
Orientation:forward strand
Alignment:CCCHCTGCTGAAA--
-----TGCTGACTCA
 G T A C A G T C A G T C G C T A A G T C C G A T A T C G A G T C C G A T A C T G C G T A G T C A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A

ZIC4/MA0751.1/Jaspar

Match Rank:7
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CCCHCTGCTGAAA
GACCCCCCGCTGTGC
 A C G T A C G T G T A C A G T C A G T C G C T A A G T C C G A T A T C G A G T C C G A T A C T G C G T A G T C A C G T A
A C T G T C G A G T A C G T A C G T A C G T A C G T A C G A T C C T A G A G T C C A G T C T A G G A C T A C T G G T A C

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.59
Offset:-8
Orientation:forward strand
Alignment:--------CCCHCTGCTGAAA
CNNBRGCGCCCCCTGSTGGC-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T A C A G T C A G T C G C T A A G T C C G A T A T C G A G T C C G A T A C T G C G T A G T C A C G T A
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C A C G T

NRL/MA0842.1/Jaspar

Match Rank:9
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CCCHCTGCTGAAA
-AATTTGCTGAC-
 G T A C A G T C A G T C G C T A A G T C C G A T A T C G A G T C C G A T A C T G C G T A G T C A C G T A
A C G T C G T A C G T A G C A T G C A T G A C T T C A G G T A C G C A T C A T G G C T A A G T C A C G T

Mafb/MA0117.2/Jaspar

Match Rank:10
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CCCHCTGCTGAAA
-AAAATGCTGACT
 G T A C A G T C A G T C G C T A A G T C C G A T A T C G A G T C C G A T A C T G C G T A G T C A C G T A
A C G T C G T A C G T A G C T A C G T A G A C T A T C G G T A C G A C T C A T G C T G A A T G C C A G T