Information for 8-TTTTTGGCTC (Motif 13)

A C G T A C G T C G A T A C G T A C G T A C T G A C T G A G T C A C G T A G T C
Reverse Opposite:
A C T G C G T A A C T G A G T C A G T C C G T A C G T A C G T A C G T A C G T A
p-value:1e-9
log p-value:-2.273e+01
Information Content per bp:1.962
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.59%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets36.8 +/- 31.4bp
Average Position of motif in Background60.3 +/- 8.9bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIX/MA0671.1/Jaspar

Match Rank:1
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:TTTTTGGCTC-
--NTTGGCANN
 A C G T A C G T C G A T A C G T A C G T A C T G A C T G A G T C A C G T A G T C A C G T
A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

NFIC/MA0161.1/Jaspar

Match Rank:2
Score:0.68
Offset:3
Orientation:forward strand
Alignment:TTTTTGGCTC
---TTGGCA-
 A C G T A C G T C G A T A C G T A C G T A C T G A C T G A G T C A C G T A G T C
A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T

POL004.1_CCAAT-box/Jaspar

Match Rank:3
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:TTTTTGGCTC--
TGATTGGCTANN
 A C G T A C G T C G A T A C G T A C G T A C T G A C T G A G T C A C G T A G T C A C G T A C G T
A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

CDX2/MA0465.1/Jaspar

Match Rank:4
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-TTTTTGGCTC
TTTTATGGCTN
 A C G T A C G T A C G T C G A T A C G T A C G T A C T G A C T G A G T C A C G T A G T C
A G C T A C G T A C G T A C G T C G T A A C G T C A T G C T A G A G T C G A C T A G C T

PH0064.1_Hoxb9/Jaspar

Match Rank:5
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----TTTTTGGCTC-
NGANTTTTATGGCTCN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C G T A C G T A C T G A C T G A G T C A C G T A G T C A C G T
G A T C C A T G C T G A C G T A G C A T C G A T C G A T C G A T C G T A A G C T C A T G C T A G T A G C A G C T A G T C A G C T

NFIA/MA0670.1/Jaspar

Match Rank:6
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:TTTTTGGCTC-
-NNTTGGCANN
 A C G T A C G T C G A T A C G T A C G T A C T G A C T G A G T C A C G T A G T C A C G T
A C G T G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C

NFY(CCAAT)/Promoter/Homer

Match Rank:7
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TTTTTGGCTC
CCGATTGGCT-
 A C G T A C G T A C G T C G A T A C G T A C G T A C T G A C T G A G T C A C G T A G T C
A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T A C G T

MEF2C/MA0497.1/Jaspar

Match Rank:8
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----TTTTTGGCTC
TTCTATTTTTAGNNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C G T A C G T A C T G A C T G A G T C A C G T A G T C
C G A T C A G T A G T C A G C T C T G A G C A T G C A T G A C T G A C T C G A T C T G A C A T G G T A C G C T A G A C T

NFYB/MA0502.1/Jaspar

Match Rank:9
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TTTTTGGCTC----
CTGATTGGTCNATTT
 A C G T A C G T A C G T C G A T A C G T A C G T A C T G A C T G A G T C A C G T A G T C A C G T A C G T A C G T A C G T
A T G C A G C T A T C G C G T A A G C T A C G T A C T G A C T G G A C T A G T C T A G C T C G A C A G T C A G T A G C T

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:10
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----TTTTTGGCTC
GCTATTTTTAGC--
 A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C G T A C G T A C T G A C T G A G T C A C G T A G T C
C A T G A G T C A G C T C G T A C G A T C G A T G C A T G C A T C G A T C T G A C A T G T G A C A C G T A C G T