Information for 13-CAGWYMTGWGGCTTCT (Motif 13)

A G T C C G T A A C T G C G A T A G T C G T A C A C G T A C T G C G T A A C T G A C T G G T A C A C G T C G A T A G T C A C G T
Reverse Opposite:
C G T A A C T G C G T A G T C A A C T G A G T C A G T C C G A T A G T C C G T A A C T G C T A G G C A T A G T C C G A T A C T G
p-value:1e-10
log p-value:-2.337e+01
Information Content per bp:1.857
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif4.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets39.0 +/- 26.6bp
Average Position of motif in Background43.3 +/- 18.6bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX1/MA0002.2/Jaspar

Match Rank:1
Score:0.60
Offset:3
Orientation:forward strand
Alignment:CAGWYMTGWGGCTTCT
---GTCTGTGGTTT--
 A G T C C G T A A C T G C G A T A G T C G T A C A C G T A C T G C G T A A C T G A C T G G T A C A C G T C G A T A G T C A C G T
A C G T A C G T A C G T A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:2
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:CAGWYMTGWGGCTTCT
----NNTGTGGTTT--
 A G T C C G T A A C T G C G A T A G T C G T A C A C G T A C T G C G T A A C T G A C T G G T A C A C G T C G A T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T A C G T

FOXH1/MA0479.1/Jaspar

Match Rank:3
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:CAGWYMTGWGGCTTCT-
------TGTGGATTNNN
 A G T C C G T A A C T G C G A T A G T C G T A C A C G T A C T G C G T A A C T G A C T G G T A C A C G T C G A T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:4
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:CAGWYMTGWGGCTTCT
-----CTGTGGTTTN-
 A G T C C G T A A C T G C G A T A G T C G T A C A C G T A C T G C G T A A C T G A C T G G T A C A C G T C G A T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:5
Score:0.54
Offset:10
Orientation:forward strand
Alignment:CAGWYMTGWGGCTTCT
----------GCTTCC
 A G T C C G T A A C T G C G A T A G T C G T A C A C G T A C T G C G T A A C T G A C T G G T A C A C G T C G A T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:6
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:CAGWYMTGWGGCTTCT
---NNHTGTGGTTWN-
 A G T C C G T A A C T G C G A T A G T C G T A C A C G T A C T G C G T A A C T G A C T G G T A C A C G T C G A T A G T C A C G T
A C G T A C G T A C G T C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:7
Score:0.53
Offset:4
Orientation:forward strand
Alignment:CAGWYMTGWGGCTTCT
----GCTGTGGTTT--
 A G T C C G T A A C T G C G A T A G T C G T A C A C G T A C T G C G T A A C T G A C T G G T A C A C G T C G A T A G T C A C G T
A C G T A C G T A C G T A C G T A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T A C G T

Mouse_Recombination_Hotspot(Zf)/Testis-DMC1-ChIP-Seq(GSE24438)/Homer

Match Rank:8
Score:0.52
Offset:-5
Orientation:forward strand
Alignment:-----CAGWYMTGWGGCTTCT
ACTYKNATTCGTGNTACTTC-
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G C G A T A G T C G T A C A C G T A C T G C G T A A C T G A C T G G T A C A C G T C G A T A G T C A C G T
C T G A G T A C G A C T A G T C C A G T T G C A C T G A A C G T A G C T G A T C C T A G C G A T A C T G A T G C G A C T C T G A G A T C G A C T A G C T G A T C A C G T

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.52
Offset:4
Orientation:forward strand
Alignment:CAGWYMTGWGGCTTCT
----NNTGTGGATTSS
 A G T C C G T A A C T G C G A T A G T C G T A C A C G T A C T G C G T A A C T G A C T G G T A C A C G T C G A T A G T C A C G T
A C G T A C G T A C G T A C G T C A T G G A C T G C A T A C T G A G C T A C T G A C T G C G T A G C A T A G C T A T C G T A C G

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:10
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:CAGWYMTGWGGCTTCT
NTGCCCANNGGTNA--
 A G T C C G T A A C T G C G A T A G T C G T A C A C G T A C T G C G T A A C T G A C T G G T A C A C G T C G A T A G T C A C G T
T G A C G C A T T C A G G T A C G A T C A G T C C G T A T A C G T C G A C T A G T C A G G A C T C A T G C T G A A C G T A C G T