Information for 3-GDGACACACAGTG (Motif 7)

T C A G C A T G T C A G C G T A G T A C T G C A T A G C C G T A A T G C C G T A A C T G A C G T T C A G
Reverse Opposite:
A G T C T G C A G T A C G C A T A T C G C G A T A C T G A C G T C A T G C G A T A G T C G T A C A G T C
p-value:1e-10
log p-value:-2.515e+01
Information Content per bp:1.679
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif2.79%
Number of Background Sequences with motif222.3
Percentage of Background Sequences with motif0.45%
Average Position of motif in Targets46.4 +/- 29.3bp
Average Position of motif in Background49.4 +/- 27.7bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SOX10/MA0442.1/Jaspar

Match Rank:1
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:GDGACACACAGTG
-----ACAAAG--
 T C A G C A T G T C A G C G T A G T A C T G C A T A G C C G T A A T G C C G T A A C T G A C G T T C A G
A C G T A C G T A C G T A C G T A C G T G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:2
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GDGACACACAGTG
AGGTGNCAGACAG--
 A C G T A C G T T C A G C A T G T C A G C G T A G T A C T G C A T A G C C G T A A T G C C G T A A C T G A C G T T C A G
C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:3
Score:0.59
Offset:6
Orientation:reverse strand
Alignment:GDGACACACAGTG
------CACAGN-
 T C A G C A T G T C A G C G T A G T A C T G C A T A G C C G T A A T G C C G T A A C T G A C G T T C A G
A C G T A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T

Sox3/MA0514.1/Jaspar

Match Rank:4
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GDGACACACAGTG
--AAAACAAAGG-
 T C A G C A T G T C A G C G T A G T A C T G C A T A G C C G T A A T G C C G T A A C T G A C G T T C A G
A C G T A C G T T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T

FOS::JUN/MA0099.2/Jaspar

Match Rank:5
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GDGACACACAGTG
-TGACTCA-----
 T C A G C A T G T C A G C G T A G T A C T G C A T A G C C G T A A T G C C G T A A C T G A C G T T C A G
A C G T A G C T A C T G G T C A T G A C C G A T A T G C C G T A A C G T A C G T A C G T A C G T A C G T

PB0130.1_Gm397_2/Jaspar

Match Rank:6
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GDGACACACAGTG--
AGCGGCACACACGCAA
 A C G T T C A G C A T G T C A G C G T A G T A C T G C A T A G C C G T A A T G C C G T A A C T G A C G T T C A G A C G T A C G T
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GDGACACACAGTG
AGGTGHCAGACA---
 A C G T A C G T T C A G C A T G T C A G C G T A G T A C T G C A T A G C C G T A A T G C C G T A A C T G A C G T T C A G
C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A A C G T A C G T A C G T

FOXP1/MA0481.1/Jaspar

Match Rank:8
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----GDGACACACAGTG
CAAAAGTAAACAAAG--
 A C G T A C G T A C G T A C G T T C A G C A T G T C A G C G T A G T A C T G C A T A G C C G T A A T G C C G T A A C T G A C G T T C A G
G T A C G C T A C G T A T C G A C T G A T C A G G C A T C G T A C G T A C G T A T G A C C G T A T G C A C G T A T C A G A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:9
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:GDGACACACAGTG
--AAACCACAGAN
 T C A G C A T G T C A G C G T A G T A C T G C A T A G C C G T A A T G C C G T A A C T G A C G T T C A G
A C G T A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

DMRT6(DM)/Testis-DMRT6-ChIP-Seq(GSE60440)/Homer

Match Rank:10
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GDGACACACAGTG--
YDGHTACAWTGTADC
 T C A G C A T G T C A G C G T A G T A C T G C A T A G C C G T A A T G C C G T A A C T G A C G T T C A G A C G T A C G T
G A C T C G A T C A T G G C T A G C A T C G T A A G T C G C T A G C A T C G A T T A C G G C A T C G T A C A G T G A T C