Information for 1-TTTGGTAGCC (Motif 5)

C A G T A G C T A C G T A C T G C T A G A C G T C G T A A C T G A T G C G A T C
Reverse Opposite:
C T A G T A C G G T A C C G A T T G C A G A T C G T A C C G T A T C G A G T C A
p-value:1e-11
log p-value:-2.575e+01
Information Content per bp:1.708
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.31%
Number of Background Sequences with motif138.4
Percentage of Background Sequences with motif0.28%
Average Position of motif in Targets53.4 +/- 27.6bp
Average Position of motif in Background50.3 +/- 25.9bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0059.1_Six6_1/Jaspar

Match Rank:1
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---TTTGGTAGCC----
ANANNTGATACCCNATN
 A C G T A C G T A C G T C A G T A G C T A C G T A C T G C T A G A C G T C G T A A C T G A T G C G A T C A C G T A C G T A C G T A C G T
C T G A C G A T C G T A G C A T C T G A G A C T C T A G C G T A A G C T G T C A A G T C G T A C A G T C A G C T G C T A C G A T G A C T

PH0166.1_Six6_2/Jaspar

Match Rank:2
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---TTTGGTAGCC----
AATNTTGATACCCTATN
 A C G T A C G T A C G T C A G T A G C T A C G T A C T G C T A G A C G T C G T A A C T G A T G C G A T C A C G T A C G T A C G T A C G T
T G C A C T G A C G A T C T G A C G A T C G A T C A T G C G T A G A C T G T C A A G T C G A T C G A T C A G C T G C T A G C A T G A C T

PB0154.1_Osr1_2/Jaspar

Match Rank:3
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---TTTGGTAGCC---
NNNTTAGGTAGCNTNT
 A C G T A C G T A C G T C A G T A G C T A C G T A C T G C T A G A C G T C G T A A C T G A T G C G A T C A C G T A C G T A C G T
A C T G C A G T G C T A C A G T A G C T C G T A C T A G A C T G C G A T C T G A C T A G A G T C C T G A C G A T C T A G G A C T

PH0165.1_Six6_1/Jaspar

Match Rank:4
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---TTTGGTAGCC----
ANANNTGATACCCTATN
 A C G T A C G T A C G T C A G T A G C T A C G T A C T G C T A G A C G T C G T A A C T G A T G C G A T C A C G T A C G T A C G T A C G T
T G C A C G A T C G T A G C T A C A G T G C A T C A T G C G T A A G C T G T C A A G T C T A G C A G T C A G C T G C T A C G A T G A C T

PB0119.1_Foxa2_2/Jaspar

Match Rank:5
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---TTTGGTAGCC--
NCNTTTGTTATTTNN
 A C G T A C G T A C G T C A G T A G C T A C G T A C T G C T A G A C G T C G T A A C T G A T G C G A T C A C G T A C G T
A T G C A T G C A T C G A G C T C A G T C A G T C T A G G C A T G A C T T C G A C A G T G A C T G C A T A G C T A G C T

PH0161.1_Six1/Jaspar

Match Rank:6
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---TTTGGTAGCC----
ANNNATGATACCCCATC
 A C G T A C G T A C G T C A G T A G C T A C G T A C T G C T A G A C G T C G T A A C T G A T G C G A T C A C G T A C G T A C G T A C G T
G T C A T G C A C G T A G T C A C T G A G A C T C A T G C G T A A G C T G T C A A G T C A T G C A G T C A G T C G C T A C G A T G A T C

Six3/MA0631.1/Jaspar

Match Rank:7
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---TTTGGTAGCC----
ANANGTGATACCCTATN
 A C G T A C G T A C G T C A G T A G C T A C G T A C T G C T A G A C G T C G T A A C T G A T G C G A T C A C G T A C G T A C G T A C G T
T G C A C G A T G C A T C G T A C T A G A C G T C A T G C G T A A G C T G T C A A G T C G T A C A G T C A G C T G C T A C G A T G A T C

PH0163.1_Six3/Jaspar

Match Rank:8
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---TTTGGTAGCC----
ANANGTGATACCCTATN
 A C G T A C G T A C G T C A G T A G C T A C G T A C T G C T A G A C G T C G T A A C T G A T G C G A T C A C G T A C G T A C G T A C G T
T G C A C G A T G C A T C G T A C T A G A C G T C A T G C G T A A G C T G T C A A G T C G T A C A G T C A G C T G C T A C G A T G A T C

PH0162.1_Six2/Jaspar

Match Rank:9
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---TTTGGTAGCC----
ANANGTGATACCCCATT
 A C G T A C G T A C G T C A G T A G C T A C G T A C T G C T A G A C G T C G T A A C T G A T G C G A T C A C G T A C G T A C G T A C G T
G T C A C T G A C G T A G T A C C T A G A G C T C A T G C G T A A G C T G T C A A G T C T G A C A G T C A G T C G T C A C G A T G A C T

MEIS2/MA0774.1/Jaspar

Match Rank:10
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TTTGGTAGCC
-TTGACAGC-
 C A G T A G C T A C G T A C T G C T A G A C G T C G T A A C T G A T G C G A T C
A C G T C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C A C G T