Information for 1-CTCTCTGCGAGGG (Motif 4)

A T G C C G A T A T G C G A C T A G T C G C A T A C T G A T G C A T C G G C T A C T A G T C A G T A C G
Reverse Opposite:
A G T C A G T C A G T C C G A T T A G C T A C G T G A C C G T A T C A G C T G A T A C G G C T A T A C G
p-value:1e-12
log p-value:-2.948e+01
Information Content per bp:1.644
Number of Target Sequences with motif32.0
Percentage of Target Sequences with motif3.89%
Number of Background Sequences with motif371.8
Percentage of Background Sequences with motif0.76%
Average Position of motif in Targets47.8 +/- 24.6bp
Average Position of motif in Background49.3 +/- 29.7bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZIC3/MA0697.1/Jaspar

Match Rank:1
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CTCTCTGCGAGGG---
-NCGCAGCGGGGGGTC
 A T G C C G A T A T G C G A C T A G T C G C A T A C T G A T G C A T C G G C T A C T A G T C A G T A C G A C G T A C G T A C G T
A C G T C A T G G T A C C T A G G A T C T G C A T C A G A G T C C T A G A C T G A C T G C A T G C A T G C A T G A G C T T G A C

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.56
Offset:5
Orientation:forward strand
Alignment:CTCTCTGCGAGGG--
-----TGCGTGGGYG
 A T G C C G A T A T G C G A C T A G T C G C A T A C T G A T G C A T C G G C T A C T A G T C A G T A C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A G T T C A G G A T C A C T G A C G T C T A G A C T G A C T G G A C T C T A G

ZIC4/MA0751.1/Jaspar

Match Rank:3
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CTCTCTGCGAGGG---
-NCNCAGCGGGGGGTC
 A T G C C G A T A T G C G A C T A G T C G C A T A C T G A T G C A T C G G C T A C T A G T C A G T A C G A C G T A C G T A C G T
A C G T C A T G T G A C C T G A G A T C G T C A T C A G G A T C C T A G C A T G C A T G C A T G C A T G C A T G A G C T T G A C

PB0140.1_Irf6_2/Jaspar

Match Rank:4
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----CTCTCTGCGAGGG
ACCACTCTCGGTCAC--
 A C G T A C G T A C G T A C G T A T G C C G A T A T G C G A C T A G T C G C A T A C T G A T G C A T C G G C T A C T A G T C A G T A C G
T G C A A G T C A G T C G C T A G T A C C A G T A T G C A G C T A G T C C T A G T C A G C A G T G A T C C T G A T A G C A C G T A C G T

INSM1/MA0155.1/Jaspar

Match Rank:5
Score:0.54
Offset:5
Orientation:forward strand
Alignment:CTCTCTGCGAGGG----
-----TGTCAGGGGGCG
 A T G C C G A T A T G C G A C T A G T C G C A T A C T G A T G C A T C G G C T A C T A G T C A G T A C G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A G T A C T G A G C T G T A C C G T A A C T G A T C G A C T G A C T G A C T G G A T C C T A G

GLIS2/MA0736.1/Jaspar

Match Rank:6
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:CTCTCTGCGAGGG---
--CTTCGCGGGGGGTC
 A T G C C G A T A T G C G A C T A G T C G C A T A C T G A T G C A T C G G C T A C T A G T C A G T A C G A C G T A C G T A C G T
A C G T A C G T T A G C C A G T G A C T G A T C T C A G G A T C C T A G C A T G A C T G C T A G C A T G C T A G A G C T T G A C

ZIC1/MA0696.1/Jaspar

Match Rank:7
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:CTCTCTGCGAGGG---
--CACAGCGGGGGGTC
 A T G C C G A T A T G C G A C T A G T C G C A T A C T G A T G C A T C G G C T A C T A G T C A G T A C G A C G T A C G T A C G T
A C G T A C G T T G A C C T G A A G T C T G C A T C A G A G T C C T A G C A T G T C A G C A T G C A T G C A T G A G C T T G A C

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:8
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:CTCTCTGCGAGGG---
-DCHCAGCAGGRGGCC
 A T G C C G A T A T G C G A C T A G T C G C A T A C T G A T G C A T C G G C T A C T A G T C A G T A C G A C G T A C G T A C G T
A C G T C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:9
Score:0.53
Offset:4
Orientation:forward strand
Alignment:CTCTCTGCGAGGG
----TTGCCAAG-
 A T G C C G A T A T G C G A C T A G T C G C A T A C T G A T G C A T C G G C T A C T A G T C A G T A C G
A C G T A C G T A C G T A C G T A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G A C G T

PB0199.1_Zfp161_2/Jaspar

Match Rank:10
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-CTCTCTGCGAGGG
NNGCNCTGCGCGGC
 A C G T A T G C C G A T A T G C G A C T A G T C G C A T A C T G A T G C A T C G G C T A C T A G T C A G T A C G
T C G A A G T C C A T G G A T C T G C A G A T C C A G T A C T G A G T C C T A G A T G C C T A G C T A G G T A C