Information for 2-CCAGGGGGTCCCCGAG (Motif 2)

A G T C T A G C G C T A C T A G A C T G C T A G A T C G A C T G A C G T A G T C A G T C G A T C T A G C A C T G C G T A A C T G
Reverse Opposite:
A G T C C G A T A G T C A T C G C T A G A C T G A C T G C G T A G T A C A T G C A G T C A G T C A G T C C G A T A T C G A C T G
p-value:1e-12
log p-value:-2.952e+01
Information Content per bp:1.797
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.85%
Number of Background Sequences with motif3.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets46.6 +/- 22.5bp
Average Position of motif in Background47.3 +/- 23.7bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MZF1/MA0056.1/Jaspar

Match Rank:1
Score:0.56
Offset:8
Orientation:reverse strand
Alignment:CCAGGGGGTCCCCGAG
--------TCCCCA--
 A G T C T A G C G C T A C T A G A C T G C T A G A T C G A C T G A C G T A G T C A G T C G A T C T A G C A C T G C G T A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A G T C G T A C A G T C G T A C T C G A A C G T A C G T

PB0052.1_Plagl1_1/Jaspar

Match Rank:2
Score:0.53
Offset:0
Orientation:forward strand
Alignment:CCAGGGGGTCCCCGAG
TTGGGGGCGCCCCTAG
 A G T C T A G C G C T A C T A G A C T G C T A G A T C G A C T G A C G T A G T C A G T C G A T C T A G C A C T G C G T A A C T G
A C G T G A C T C T A G C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C A C G T T C G A T A C G

PB0156.1_Plagl1_2/Jaspar

Match Rank:3
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-CCAGGGGGTCCCCGAG
GCTGGGGGGTACCCCTT
 A C G T A G T C T A G C G C T A C T A G A C T G C T A G A T C G A C T G A C G T A G T C A G T C G A T C T A G C A C T G C G T A A C T G
C T A G A G T C G C A T C T A G C A T G A C T G C T A G A C T G A C T G A C G T C T G A G A T C G T A C G T A C G A T C G A C T C G A T

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:4
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:CCAGGGGGTCCCCGAG
--NRRGGGTCTT----
 A G T C T A G C G C T A C T A G A C T G C T A G A T C G A C T G A C G T A G T C A G T C G A T C T A G C A C T G C G T A A C T G
A C G T A C G T A C T G T C G A C T A G A C T G A C T G A C T G A C G T A G T C A C G T A G C T A C G T A C G T A C G T A C G T

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:5
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--CCAGGGGGTCCCCGAG
NNANTGGTGGTCTTNNN-
 A C G T A C G T A G T C T A G C G C T A C T A G A C T G C T A G A T C G A C T G A C G T A G T C A G T C G A T C T A G C A C T G C G T A A C T G
T C A G A G C T G T C A T G C A C G A T C T A G C T A G C A G T A T C G C A T G C A G T T G A C A C G T G A C T G T C A G C A T C T A G A C G T

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:6
Score:0.51
Offset:1
Orientation:forward strand
Alignment:CCAGGGGGTCCCCGAG
-GGGGGAATCCCC---
 A G T C T A G C G C T A C T A G A C T G C T A G A T C G A C T G A C G T A G T C A G T C G A T C T A G C A C T G C G T A A C T G
A C G T T C A G C T A G C T A G C T A G T C A G T C G A C T G A C G A T A G T C G A T C A G T C T G A C A C G T A C G T A C G T

VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer

Match Rank:7
Score:0.50
Offset:3
Orientation:forward strand
Alignment:CCAGGGGGTCCCCGAG-------
---NGAGGTCANNGAGTTCANNN
 A G T C T A G C G C T A C T A G A C T G C T A G A T C G A C T G A C G T A G T C A G T C G A T C T A G C A C T G C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T G A T C A G C T G A C T A G C A T G A C G T A T G C C G T A A T G C G C A T T C A G C T G A A C T G A C G T C A G T A G T C C G T A C A G T C T A G C A T G

RXRA::VDR/MA0074.1/Jaspar

Match Rank:8
Score:0.50
Offset:5
Orientation:forward strand
Alignment:CCAGGGGGTCCCCGAG----
-----GGGTCAACGAGTTCA
 A G T C T A G C G C T A C T A G A C T G C T A G A T C G A C T G A C G T A G T C A G T C G A T C T A G C A C T G C G T A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G A C T G A C T G A C G T A G T C C T G A G C A T A G T C C T A G C T A G A C T G A C G T C G A T A G T C T C G A

PB0025.1_Glis2_1/Jaspar

Match Rank:9
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--CCAGGGGGTCCCCGAG
NTNTGGGGGGTCNNNA--
 A C G T A C G T A G T C T A G C G C T A C T A G A C T G C T A G A T C G A C T G A C G T A G T C A G T C G A T C T A G C A C T G C G T A A C T G
G T A C G A C T T C A G A C G T C T A G C T A G C A T G C A T G A C T G A C T G A C G T T G A C A T C G C G T A C G A T C T G A A C G T A C G T

Znf423/MA0116.1/Jaspar

Match Rank:10
Score:0.50
Offset:-5
Orientation:forward strand
Alignment:-----CCAGGGGGTCCCCGAG
GGCACCCAGGGGTGC------
 A C G T A C G T A C G T A C G T A C G T A G T C T A G C G C T A C T A G A C T G C T A G A T C G A C T G A C G T A G T C A G T C G A T C T A G C A C T G C G T A A C T G
T C A G A T C G G T A C G T C A A G T C A G T C G A T C C G T A C T A G A C T G A C T G A C T G A C G T A C T G G T A C A C G T A C G T A C G T A C G T A C G T A C G T