Information for 10-CCCCATATAT (Motif 19)

A G T C A G T C A G T C A G T C C G T A A C G T C G T A A C G T G C T A A C G T
Reverse Opposite:
C G T A C G A T C G T A A C G T C G T A C G A T A C T G A C T G A C T G A C T G
p-value:1e-6
log p-value:-1.402e+01
Information Content per bp:1.935
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.85%
Number of Background Sequences with motif29.2
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets43.0 +/- 29.2bp
Average Position of motif in Background51.7 +/- 22.4bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SRF/MA0083.3/Jaspar

Match Rank:1
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-CCCCATATAT-----
TGNCCATATATGGTCA
 A C G T A G T C A G T C A G T C A G T C C G T A A C G T C G T A A C G T G C T A A C G T A C G T A C G T A C G T A C G T A C G T
G C A T A C T G G T C A G A T C A T G C C G T A C G A T T G C A A G C T G C T A G C A T T C A G A T C G C A G T T G A C C G T A

PB0128.1_Gcm1_2/Jaspar

Match Rank:2
Score:0.70
Offset:-4
Orientation:reverse strand
Alignment:----CCCCATATAT---
NTCNTCCCCTATNNGNN
 A C G T A C G T A C G T A C G T A G T C A G T C A G T C A G T C C G T A A C G T C G T A A C G T G C T A A C G T A C G T A C G T A C G T
T G A C C A G T A G T C T A G C A G C T A G T C T A G C G T A C G T A C A G C T C T G A A G C T C A T G A T G C T A C G G T A C G C T A

MF0008.1_MADS_class/Jaspar

Match Rank:3
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:CCCCATATAT--
--CCATATATGG
 A G T C A G T C A G T C A G T C C G T A A C G T C G T A A C G T G C T A A C G T A C G T A C G T
A C G T A C G T G T A C G A T C C G T A G C A T C G T A G C A T G C T A C G A T T C A G C T A G

CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan_et_al.)/Homer

Match Rank:4
Score:0.68
Offset:2
Orientation:forward strand
Alignment:CCCCATATAT----
--CCATATATGGNA
 A G T C A G T C A G T C A G T C C G T A A C G T C G T A A C G T G C T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A T G C A G T C G C T A C G A T C G T A G C A T G C T A C G A T C T A G C A T G T G A C G T C A

PB0092.1_Zbtb7b_1/Jaspar

Match Rank:5
Score:0.67
Offset:-5
Orientation:forward strand
Alignment:-----CCCCATATAT
AAGCCCCCCAAAAAT
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C A G T C A G T C C G T A A C G T C G T A A C G T G C T A A C G T
C T G A C T G A T C A G T A G C T A G C G T A C G T A C A G T C G A T C G C T A G C T A G C T A C G T A G T C A A G C T

Twist2/MA0633.1/Jaspar

Match Rank:6
Score:0.67
Offset:1
Orientation:forward strand
Alignment:CCCCATATAT-
-ACCATATGTT
 A G T C A G T C A G T C A G T C C G T A A C G T C G T A A C G T G C T A A C G T A C G T
A C G T C T G A G T A C A G T C C G T A A G C T C T G A A C G T A C T G A C G T A C G T

Bhlha15/MA0607.1/Jaspar

Match Rank:7
Score:0.67
Offset:2
Orientation:forward strand
Alignment:CCCCATATAT
--CCATATGT
 A G T C A G T C A G T C A G T C C G T A A C G T C G T A A C G T G C T A A C G T
A C G T A C G T T A G C A G T C C G T A A C G T G T C A A C G T A C T G A G C T

PB0078.1_Srf_1/Jaspar

Match Rank:8
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CCCCATATAT----
TTCCATATATGGAA
 A G T C A G T C A G T C A G T C C G T A A C G T C G T A A C G T G C T A A C G T A C G T A C G T A C G T A C G T
G C A T C G A T G T A C A G T C C G T A C G A T C G T A G C A T C G T A G C A T C T A G C A T G G C A T G T C A

HLTF/MA0109.1/Jaspar

Match Rank:9
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CCCCATATAT
AACCTTATAT
 A G T C A G T C A G T C A G T C C G T A A C G T C G T A A C G T G C T A A C G T
C G T A G C T A G T A C A G T C C G A T A C G T C G T A A C G T T C G A G A C T

POL012.1_TATA-Box/Jaspar

Match Rank:10
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---CCCCATATAT--
NNNNNNCTTTTATAN
 A C G T A C G T A C G T A G T C A G T C A G T C A G T C C G T A A C G T C G T A A C G T G C T A A C G T A C G T A C G T
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C