Information for 7-CCCGGGACAG (Motif 18)

A T G C A T G C T G A C C T A G A T C G T C A G C T G A T A G C T C G A T C A G
Reverse Opposite:
A G T C A G C T A T C G G A C T A G T C T A G C A G T C A C T G T A C G T A C G
p-value:1e-9
log p-value:-2.096e+01
Information Content per bp:1.688
Number of Target Sequences with motif79.0
Percentage of Target Sequences with motif9.60%
Number of Background Sequences with motif2236.5
Percentage of Background Sequences with motif4.56%
Average Position of motif in Targets50.1 +/- 26.6bp
Average Position of motif in Background50.3 +/- 29.1bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.13
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.70
Offset:0
Orientation:forward strand
Alignment:CCCGGGACAG
CCAGGAACAG
 A T G C A T G C T G A C C T A G A T C G T C A G C T G A T A G C T C G A T C A G
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G

PB0153.1_Nr2f2_2/Jaspar

Match Rank:2
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---CCCGGGACAG---
CGCGCCGGGTCACGTA
 A C G T A C G T A C G T A T G C A T G C T G A C C T A G A T C G T C A G C T G A T A G C T C G A T C A G A C G T A C G T A C G T
T A G C A C T G T G A C A C T G A G T C A T G C C T A G A C T G A C T G A C G T A G T C C T G A T A G C A C T G A G C T G C T A

Tcfl5/MA0632.1/Jaspar

Match Rank:3
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CCCGGGACAG
GGCACGTGCC--
 A C G T A C G T A T G C A T G C T G A C C T A G A T C G T C A G C T G A T A G C T C G A T C A G
C T A G A C T G G T A C C T G A A G T C T C A G G A C T C A T G T G A C G A T C A C G T A C G T

REST/MA0138.2/Jaspar

Match Rank:4
Score:0.60
Offset:-7
Orientation:forward strand
Alignment:-------CCCGGGACAG----
TTCAGCACCATGGACAGCGCC
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A T G C T G A C C T A G A T C G T C A G C T G A T A G C T C G A T C A G A C G T A C G T A C G T A C G T
C A G T A G C T G A T C T C G A T A C G A T G C C G T A A T G C G A T C G C T A G A C T C T A G T C A G G T C A A T G C G C T A T C A G G T A C C A T G T A G C G A T C

E2F(E2F)/Hela-CellCycle-Expression/Homer

Match Rank:5
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CCCGGGACAG
TTCGCGCGAAAA
 A C G T A C G T A T G C A T G C T G A C C T A G A T C G T C A G C T G A T A G C T C G A T C A G
A G C T A G C T T A G C A T C G A G T C A C T G A T G C A T C G T C G A C T G A T C G A C T G A

PB0140.1_Irf6_2/Jaspar

Match Rank:6
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---CCCGGGACAG--
NNNACCGAGAGTNNN
 A C G T A C G T A C G T A T G C A T G C T G A C C T A G A T C G T C A G C T G A T A G C T C G A T C A G A C G T A C G T
A T C G G A C T C A T G G T C A A G T C G A T C C T A G T C G A T A C G G T C A C A T G C G A T T C A G T A C G A C G T

ZBTB33/MA0527.1/Jaspar

Match Rank:7
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----CCCGGGACAG
NAGNTCTCGCGAGAN
 A C G T A C G T A C G T A C G T A C G T A T G C A T G C T G A C C T A G A T C G T C A G C T G A T A G C T C G A T C A G
T A G C T C G A T C A G T C G A A G C T T G A C A G C T A G T C C T A G G A T C A C T G C T G A A C T G T C G A T C A G

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:8
Score:0.59
Offset:-6
Orientation:reverse strand
Alignment:------CCCGGGACAG----
TCAGCACCATGGACAGCTCC
 A C G T A C G T A C G T A C G T A C G T A C G T A T G C A T G C T G A C C T A G A T C G T C A G C T G A T A G C T C G A T C A G A C G T A C G T A C G T A C G T
A G C T G A T C C T G A T C A G T A G C C T G A A T G C G A T C G C T A G A C T C T A G C T A G G T C A A T G C C G T A T C A G G T A C C A G T T A G C G A T C

TFAP2C/MA0524.2/Jaspar

Match Rank:9
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---CCCGGGACAG
TGCCCCAGGGCA-
 A C G T A C G T A C G T A T G C A T G C T G A C C T A G A T C G T C A G C T G A T A G C T C G A T C A G
G A C T T A C G T A G C G A T C A G T C A G T C T C G A T C A G C T A G T A C G A T G C C T G A A C G T

TFAP2B/MA0811.1/Jaspar

Match Rank:10
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---CCCGGGACAG
TGCCCCAGGGCA-
 A C G T A C G T A C G T A T G C A T G C T G A C C T A G A T C G T C A G C T G A T A G C T C G A T C A G
G A C T T A C G A T G C G A T C A G T C A G T C T C G A T C A G T C A G T A C G A T G C C T G A A C G T