Information for 5-CTGTGCTCTG (Motif 16)

A G T C G C A T A T C G G C A T T A C G A G T C A G C T A G T C C G A T A C T G
Reverse Opposite:
T G A C G C T A T C A G T C G A T C A G A T G C C G T A T A G C C G T A T C A G
p-value:1e-9
log p-value:-2.180e+01
Information Content per bp:1.648
Number of Target Sequences with motif163.0
Percentage of Target Sequences with motif19.81%
Number of Background Sequences with motif5983.0
Percentage of Background Sequences with motif12.19%
Average Position of motif in Targets52.3 +/- 25.1bp
Average Position of motif in Background50.4 +/- 28.8bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.19
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:1
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:CTGTGCTCTG
CTGTGGTTTN
 A G T C G C A T A T C G G C A T T A C G A G T C A G C T A G T C C G A T A C T G
G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:2
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-CTGTGCTCTG
GCTGTGGTTT-
 A C G T A G T C G C A T A T C G G C A T T A C G A G T C A G C T A G T C C G A T A C T G
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:3
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--CTGTGCTCTG
GTCTGTGGTTT-
 A C G T A C G T A G T C G C A T A T C G G C A T T A C G A G T C A G C T A G T C C G A T A C T G
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:4
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-CTGTGCTCTG
GCTGTG-----
 A C G T A G T C G C A T A T C G G C A T T A C G A G T C A G C T A G T C C G A T A C T G
T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:5
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:CTGTGCTCTG
CTGTTCCTGG
 A G T C G C A T A T C G G C A T T A C G A G T C A G C T A G T C C G A T A C T G
T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:6
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--CTGTGCTCTG
NNHTGTGGTTWN
 A C G T A C G T A G T C G C A T A T C G G C A T T A C G A G T C A G C T A G T C C G A T A C T G
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

PB0099.1_Zfp691_1/Jaspar

Match Rank:7
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----CTGTGCTCTG---
CGAACAGTGCTCACTAT
 A C G T A C G T A C G T A C G T A G T C G C A T A T C G G C A T T A C G A G T C A G C T A G T C C G A T A C T G A C G T A C G T A C G T
A G T C C A T G G C T A T C G A G A T C T C G A A C T G C G A T C T A G G T A C A G C T A G T C T G C A A G T C G C A T C T G A C G A T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CTGTGCTCTG
CTGACCTTTG
 A G T C G C A T A T C G G C A T T A C G A G T C A G C T A G T C C G A T A C T G
A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:9
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CTGTGCTCTG
NNTGTGGTTT-
 A C G T A G T C G C A T A T C G G C A T T A C G A G T C A G C T A G T C C G A T A C T G
A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T

PB0040.1_Lef1_1/Jaspar

Match Rank:10
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----CTGTGCTCTG--
AATCCCTTTGATCTATC
 A C G T A C G T A C G T A C G T A C G T A G T C G C A T A T C G G C A T T A C G A G T C A G C T A G T C C G A T A C T G A C G T A C G T
C T A G C T G A C G A T A G T C A G T C A G T C G A C T G A C T C G A T A T C G C G T A C G A T T A G C G C A T C G T A C G A T T G A C