Information for 3-CTTGCCCWGT (Motif 12)

G A T C C A G T G A C T T A C G T G A C G T A C G T A C G C A T A C T G A C G T
Reverse Opposite:
T G C A T G A C C G T A C A T G C A T G A C T G A T G C C T G A G T C A C T A G
p-value:1e-10
log p-value:-2.305e+01
Information Content per bp:1.484
Number of Target Sequences with motif35.0
Percentage of Target Sequences with motif4.25%
Number of Background Sequences with motif564.9
Percentage of Background Sequences with motif1.15%
Average Position of motif in Targets52.1 +/- 25.7bp
Average Position of motif in Background50.3 +/- 27.7bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.74
Offset:2
Orientation:reverse strand
Alignment:CTTGCCCWGT--
--TGCCCAGNHW
 G A T C C A G T G A C T T A C G T G A C G T A C G T A C G C A T A C T G A C G T A C G T A C G T
A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:2
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----CTTGCCCWGT
TGACCTTGACCT--
 A C G T A C G T A C G T A C G T G A T C C A G T G A C T T A C G T G A C G T A C G T A C G C A T A C T G A C G T
G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:3
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:CTTGCCCWGT
--TGACCTYA
 G A T C C A G T G A C T T A C G T G A C G T A C G T A C G C A T A C T G A C G T
A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A

HIC2/MA0738.1/Jaspar

Match Rank:4
Score:0.65
Offset:1
Orientation:forward strand
Alignment:CTTGCCCWGT
-ATGCCCACC
 G A T C C A G T G A C T T A C G T G A C G T A C G T A C G C A T A C T G A C G T
A C G T T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C

PB0049.1_Nr2f2_1/Jaspar

Match Rank:5
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--CTTGCCCWGT----
NNNNTGACCTTTNNNN
 A C G T A C G T G A T C C A G T G A C T T A C G T G A C G T A C G T A C G C A T A C T G A C G T A C G T A C G T A C G T A C G T
A G T C C G A T A T G C C A T G A G C T T C A G G T C A G T A C G T A C A G C T A G C T G C A T C A T G T C G A C A T G G T C A

NR2F1/MA0017.2/Jaspar

Match Rank:6
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--CTTGCCCWGT-
CNNTTGACCTTTG
 A C G T A C G T G A T C C A G T G A C T T A C G T G A C G T A C G T A C G C A T A C T G A C G T A C G T
G A T C A G T C A G T C C A G T A G C T A C T G C G T A A G T C A T G C A G C T G A C T C G A T C A T G

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:7
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:CTTGCCCWGT
--TGACCT--
 G A T C C A G T G A C T T A C G T G A C G T A C G T A C G C A T A C T G A C G T
A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:8
Score:0.64
Offset:1
Orientation:forward strand
Alignment:CTTGCCCWGT
-CTGCCCGCA
 G A T C C A G T G A C T T A C G T G A C G T A C G T A C G C A T A C T G A C G T
A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A

NR4A2/MA0160.1/Jaspar

Match Rank:9
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CTTGCCCWGT
-GTGACCTT-
 G A T C C A G T G A C T T A C G T G A C G T A C G T A C G C A T A C T G A C G T
A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T A C G T

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:10
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----CTTGCCCWGT
TGACCTTGACCT--
 A C G T A C G T A C G T A C G T G A T C C A G T G A C T T A C G T G A C G T A C G T A C G C A T A C T G A C G T
G A C T T C A G T G C A A G T C A G T C G A C T A C G T T A C G C G T A G T A C G A T C G A C T A C G T A C G T