Information for 19-CCKGWGCCSGTSC (Motif 48)

A T G C A G T C A C T G A C T G C G A T A C T G A G T C A G T C A T C G A C T G A C G T A T G C A G T C
Reverse Opposite:
A C T G A T C G C G T A A G T C A T G C A C T G A C T G G T A C C G T A A G T C G T A C A C T G A T C G
p-value:1e-6
log p-value:-1.434e+01
Information Content per bp:1.873
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.52%
Number of Background Sequences with motif4.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets60.4 +/- 27.6bp
Average Position of motif in Background38.8 +/- 21.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.59
Offset:3
Orientation:forward strand
Alignment:CCKGWGCCSGTSC
---GAGSCCGAGC
 A T G C A G T C A C T G A C T G C G A T A C T G A G T C A G T C A T C G A C T G A C G T A T G C A G T C
A C G T A C G T A C G T A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C

POL013.1_MED-1/Jaspar

Match Rank:2
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CCKGWGCCSGTSC
-CGGAGC------
 A T G C A G T C A C T G A C T G C G A T A C T G A G T C A G T C A T C G A C T G A C G T A T G C A G T C
A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:3
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:CCKGWGCCSGTSC--
---SDGCAGGTGCNS
 A T G C A G T C A C T G A C T G C G A T A C T G A G T C A G T C A T C G A C T G A C G T A T G C A G T C A C G T A C G T
A C G T A C G T A C G T A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:4
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:CCKGWGCCSGTSC
-CTGTTCCTGG--
 A T G C A G T C A C T G A C T G C G A T A C T G A G T C A G T C A T C G A C T G A C G T A T G C A G T C
A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G A C G T A C G T

ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.52
Offset:-9
Orientation:forward strand
Alignment:---------CCKGWGCCSGTSC
GAGCCTGGTACTGWGCCTGR--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C A C T G A C T G C G A T A C T G A G T C A G T C A T C G A C T G A C G T A T G C A G T C
T A C G C T G A C A T G G A T C G T A C G C A T T C A G T A C G A G C T G T C A G A T C G C A T T A C G C G T A C T A G G A T C G A T C C G A T A C T G T C A G A C G T A C G T

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:6
Score:0.51
Offset:1
Orientation:forward strand
Alignment:CCKGWGCCSGTSC
-CTGCGCATGCGC
 A T G C A G T C A C T G A C T G C G A T A C T G A G T C A G T C A T C G A C T G A C G T A T G C A G T C
A C G T A T G C A G C T T C A G T G A C T C A G A T G C T G C A A C G T A T C G G A T C A C T G A G T C

POL009.1_DCE_S_II/Jaspar

Match Rank:7
Score:0.50
Offset:0
Orientation:forward strand
Alignment:CCKGWGCCSGTSC
GCTGTG-------
 A T G C A G T C A C T G A C T G C G A T A C T G A G T C A G T C A T C G A C T G A C G T A T G C A G T C
T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.50
Offset:-3
Orientation:reverse strand
Alignment:---CCKGWGCCSGTSC
ATGCCCGGGCATGT--
 A C G T A C G T A C G T A T G C A G T C A C T G A C T G C G A T A C T G A G T C A G T C A T C G A C T G A C G T A T G C A G T C
G T C A C G A T A C T G A G T C A G T C G A T C C T A G C T A G T C A G A T G C G C T A C G A T A T C G G A C T A C G T A C G T

PB0153.1_Nr2f2_2/Jaspar

Match Rank:9
Score:0.49
Offset:-2
Orientation:reverse strand
Alignment:--CCKGWGCCSGTSC-
NNNNTGACCCGGCGCG
 A C G T A C G T A T G C A G T C A C T G A C T G C G A T A C T G A G T C A G T C A T C G A C T G A C G T A T G C A G T C A C G T
C G A T T C G A T A G C A T C G A G C T T C A G G T C A G T A C G T A C A G T C T A C G T C A G G T A C A C T G G T A C A C T G

HIC2/MA0738.1/Jaspar

Match Rank:10
Score:0.49
Offset:3
Orientation:forward strand
Alignment:CCKGWGCCSGTSC
---ATGCCCACC-
 A T G C A G T C A C T G A C T G C G A T A C T G A G T C A G T C A T C G A C T G A C G T A T G C A G T C
A C G T A C G T A C G T T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C A C G T