Information for 13-AGGGAGTTAG (Motif 47)

C G T A A C T G C T A G A C T G C T G A C A T G G C A T A C G T C G T A C A T G
Reverse Opposite:
G T A C G C A T C G T A C G T A G T A C A G C T A G T C A G T C G T A C C G A T
p-value:1e-6
log p-value:-1.443e+01
Information Content per bp:1.799
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.70%
Number of Background Sequences with motif141.4
Percentage of Background Sequences with motif0.29%
Average Position of motif in Targets52.5 +/- 24.6bp
Average Position of motif in Background50.0 +/- 25.8bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0149.1_Myb_2/Jaspar

Match Rank:1
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---AGGGAGTTAG---
NNNTGGCAGTTGGTNN
 A C G T A C G T A C G T C G T A A C T G C T A G A C T G C T G A C A T G G C A T A C G T C G T A C A T G A C G T A C G T A C G T
C T A G T A G C T C G A G A C T C T A G C T A G A G T C C T G A A C T G A C G T G A C T C T A G T C A G C A G T G T A C T A C G

Myb/MA0100.2/Jaspar

Match Rank:2
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:AGGGAGTTAG
TGGCAGTTGN
 C G T A A C T G C T A G A C T G C T G A C A T G G C A T A C G T C G T A C A T G
C G A T A C T G C T A G A G T C C G T A A C T G A G C T A C G T C T A G T C A G

Crx/MA0467.1/Jaspar

Match Rank:3
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-AGGGAGTTAG
AAGAGGATTAG
 A C G T C G T A A C T G C T A G A C T G C T G A C A T G G C A T A C G T C G T A C A T G
T C G A C T G A C T A G T C G A C T A G A C T G G T C A A C G T A G C T C G T A C T A G

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:4
Score:0.59
Offset:0
Orientation:forward strand
Alignment:AGGGAGTTAG
TGGCAGTTGG
 C G T A A C T G C T A G A C T G C T G A C A T G G C A T A C G T C G T A C A T G
G A C T C T A G C T A G A G T C T G C A A C T G A C G T A C G T C T A G T C A G

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:5
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:AGGGAGTTAG
-NGGGATTA-
 C G T A A C T G C T A G A C T G C T G A C A T G G C A T A C G T C G T A C A T G
A C G T T G A C C T A G C T A G T C A G G T C A G C A T G A C T G C T A A C G T

PH0015.1_Crx/Jaspar

Match Rank:6
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---AGGGAGTTAG---
CGTTGGGGATTAGCCT
 A C G T A C G T A C G T C G T A A C T G C T A G A C T G C T G A C A T G G C A T A C G T C G T A C A T G A C G T A C G T A C G T
A G T C A C T G C G A T C G A T T A C G T A C G C T A G A C T G G T C A A C G T C G A T C G T A C T A G A G T C A T G C C A G T

PH0139.1_Pitx3/Jaspar

Match Rank:7
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-AGGGAGTTAG-----
AGGGGGATTAGCTGCC
 A C G T C G T A A C T G C T A G A C T G C T G A C A T G G C A T A C G T C G T A C A T G A C G T A C G T A C G T A C G T A C G T
T C G A C T A G T A C G C T A G C T A G A C T G G T C A A G C T G A C T C G T A C A T G A T G C A C G T C T A G A T G C A T G C

PB0150.1_Mybl1_2/Jaspar

Match Rank:8
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--AGGGAGTTAG---
CACGGCAGTTGGTNN
 A C G T A C G T C G T A A C T G C T A G A C T G C T G A C A T G G C A T A C G T C G T A C A T G A C G T A C G T A C G T
T G A C C G T A A G T C C A T G C T A G A G T C T C G A A C T G A C G T C A G T C T A G C T A G A C G T T A G C T A C G

GSC/MA0648.1/Jaspar

Match Rank:9
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:AGGGAGTTAG-
-NNGGATTAGN
 C G T A A C T G C T A G A C T G C T G A C A T G G C A T A C G T C G T A C A T G A C G T
A C G T C T A G T A C G T C A G T C A G T G C A A C G T G A C T C T G A C T A G A T G C

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:10
Score:0.54
Offset:1
Orientation:forward strand
Alignment:AGGGAGTTAG
-GGCVGTTR-
 C G T A A C T G C T A G A C T G C T G A C A T G G C A T A C G T C G T A C A T G
A C G T C T A G C T A G A G T C T C A G A C T G A C G T A C G T C T G A A C G T