Information for 16-CCAGGGCTSKGAC (Motif 42)

A G T C A G T C C G T A A C T G A C T G A C T G A G T C A C G T A T C G A C G T A C T G G T C A A G T C
Reverse Opposite:
A C T G A C G T A G T C G T C A A T G C C G T A A C T G A G T C A G T C A G T C A C G T A C T G A C T G
p-value:1e-7
log p-value:-1.763e+01
Information Content per bp:1.923
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.65%
Number of Background Sequences with motif5.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets45.2 +/- 16.8bp
Average Position of motif in Background55.0 +/- 31.4bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CCAGGGCTSKGAC
CNAGGCCT-----
 A G T C A G T C C G T A A C T G A C T G A C T G A G T C A C G T A T C G A C G T A C T G G T C A A G T C
A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T A C G T A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:2
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CCAGGGCTSKGAC
CTAGGCCT-----
 A G T C A G T C C G T A A C T G A C T G A C T G A G T C A C G T A T C G A C G T A C T G G T C A A G T C
T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T A C G T A C G T A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:3
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CCAGGGCTSKGAC--
-CAGGCCNNGGCCNN
 A G T C A G T C C G T A A C T G A C T G A C T G A G T C A C G T A T C G A C G T A C T G G T C A A G T C A C G T A C G T
A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:4
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CCAGGGCTSKGAC--
-NAGGTCANTGACCT
 A G T C A G T C C G T A A C T G A C T G A C T G A G T C A C G T A T C G A C G T A C T G G T C A A G T C A C G T A C G T
A C G T T C A G T C G A C T A G C A T G A C G T A T G C T C G A G A C T A G C T T A C G T G C A G T A C G T A C A G C T

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:5
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---CCAGGGCTSKGAC
GGGGCTYGKCTGGGA-
 A C G T A C G T A C G T A G T C A G T C C G T A A C T G A C T G A C T G A G T C A C G T A T C G A C G T A C T G G T C A A G T C
C T A G C A T G C A T G T A C G A G T C G C A T A G C T C T A G A C G T A G T C G A C T A C T G A C T G A C T G T C G A A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:6
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:CCAGGGCTSKGAC
----NGCTN----
 A G T C A G T C C G T A A C T G A C T G A C T G A G T C A C G T A T C G A C G T A C T G G T C A A G T C
A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T

PB0200.1_Zfp187_2/Jaspar

Match Rank:7
Score:0.54
Offset:-7
Orientation:reverse strand
Alignment:-------CCAGGGCTSKGAC
NNAGGGACAAGGGCNC----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G T A A C T G A C T G A C T G A G T C A C G T A T C G A C G T A C T G G T C A A G T C
A G C T C G A T C T G A C A T G C T A G C T A G C G T A A G T C T C G A C T G A C T A G C T A G C A T G A G T C G A C T G T A C A C G T A C G T A C G T A C G T

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:8
Score:0.54
Offset:2
Orientation:forward strand
Alignment:CCAGGGCTSKGAC-
--AGGTCTCTAACC
 A G T C A G T C C G T A A C T G A C T G A C T G A G T C A C G T A T C G A C G T A C T G G T C A A G T C A C G T
A C G T A C G T C T G A T C A G A C T G C A G T A G T C G A C T A G T C A C G T C G T A G C T A A T G C G A T C

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--CCAGGGCTSKGAC
WDNCTGGGCA-----
 A C G T A C G T A G T C A G T C C G T A A C T G A C T G A C T G A G T C A C G T A T C G A C G T A C T G G T C A A G T C
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T A C G T A C G T

ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.53
Offset:2
Orientation:forward strand
Alignment:CCAGGGCTSKGAC-
--RGGGCACTAACY
 A G T C A G T C C G T A A C T G A C T G A C T G A G T C A C G T A T C G A C G T A C T G G T C A A G T C A C G T
A C G T A C G T T C G A C A T G C A T G T A C G G T A C T C G A A G T C C A G T C T G A C G T A A G T C G A C T