Information for 16-GTTTGAGTGGGTKAGT (Motif 26)

A C T G A G C T A C G T A C G T A T C G C T G A A T C G A C G T A C T G A C T G A T C G A C G T A C G T C G T A A C T G A C G T
Reverse Opposite:
G T C A A G T C C G A T T G C A G T C A T A G C A G T C G T A C G T C A A T G C A G C T A T G C G T C A G T C A C T G A A G T C
p-value:1e-9
log p-value:-2.171e+01
Information Content per bp:1.741
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.91%
Number of Background Sequences with motif10.0
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets48.1 +/- 27.4bp
Average Position of motif in Background48.7 +/- 19.0bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:1
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:GTTTGAGTGGGTKAGT
-CTTGAGTGGCT----
 A C T G A G C T A C G T A C G T A T C G C T G A A T C G A C G T A C T G A C T G A T C G A C G T A C G T C G T A A C T G A C G T
A C G T A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T A C G T A C G T A C G T A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:2
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:GTTTGAGTGGGTKAGT
--TTGAGTGSTT----
 A C T G A G C T A C G T A C G T A T C G C T G A A T C G A C G T A C T G A C T G A T C G A C G T A C G T C G T A A C T G A C G T
A C G T A C G T G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T A C G T A C G T A C G T A C G T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:3
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GTTTGAGTGGGTKAGT
-BTBRAGTGSN-----
 A C T G A G C T A C G T A C G T A T C G C T G A A T C G A C G T A C T G A C T G A T C G A C G T A C G T C G T A A C T G A C G T
A C G T A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C A C G T A C G T A C G T A C G T A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:4
Score:0.61
Offset:2
Orientation:forward strand
Alignment:GTTTGAGTGGGTKAGT
--TTRAGTGSYK----
 A C T G A G C T A C G T A C G T A T C G C T G A A T C G A C G T A C T G A C T G A T C G A C G T A C G T C G T A A C T G A C G T
A C G T A C G T A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T A C G T A C G T A C G T A C G T

PB0114.1_Egr1_2/Jaspar

Match Rank:5
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GTTTGAGTGGGTKAGT
TGCGGAGTGGGACTGG
 A C T G A G C T A C G T A C G T A T C G C T G A A T C G A C G T A C T G A C T G A T C G A C G T A C G T C G T A A C T G A C G T
A C G T A C T G G A T C A C T G C T A G T C G A C T A G C A G T C T A G C A T G C A T G C G T A G A T C G C A T C T A G A C T G

PH0171.1_Nkx2-1/Jaspar

Match Rank:6
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GTTTGAGTGGGTKAGT
AANTTCAAGTGGCTTN--
 A C G T A C G T A C T G A G C T A C G T A C G T A T C G C T G A A T C G A C G T A C T G A C T G A T C G A C G T A C G T C G T A A C T G A C G T
C G T A C G T A C A G T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G T A G C G A C T A C G T T C G A A C G T A C G T

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:7
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GTTTGAGTGGGTKAGT
NTNNTTAAGTGGNTNAN-
 A C G T A C G T A C T G A G C T A C G T A C G T A T C G C T G A A T C G A C G T A C T G A C T G A T C G A C G T A C G T C G T A A C T G A C G T
T C G A A G C T A G T C A T G C G C A T C G A T C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G T A C A T G A C G T

PH0113.1_Nkx2-4/Jaspar

Match Rank:8
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GTTTGAGTGGGTKAGT
AATTTCAAGTGGCTTN--
 A C G T A C G T A C T G A G C T A C G T A C G T A T C G C T G A A T C G A C G T A C T G A C T G A T C G A C G T A C G T C G T A A C T G A C G T
C T G A C G T A C G A T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G A G T C G C A T G A C T C G T A A C G T A C G T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:9
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GTTTGAGTGGGTKAGT
-CTYRAGTGSY-----
 A C T G A G C T A C G T A C G T A T C G C T G A A T C G A C G T A C T G A C T G A T C G A C G T A C G T C G T A A C T G A C G T
A C G T A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C A C G T A C G T A C G T A C G T A C G T

PH0114.1_Nkx2-5/Jaspar

Match Rank:10
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GTTTGAGTGGGTKAGT
AAATTCAAGTGGNTTN--
 A C G T A C G T A C T G A G C T A C G T A C G T A T C G C T G A A T C G A C G T A C T G A C T G A T C G A C G T A C G T C G T A A C T G A C G T
C T G A C T G A C G T A A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G T A C G A C T G A C T C G T A A C G T A C G T