Information for 2-GGCCACAGAGGAC (Motif 8)

C T A G A C T G A G T C A G T C C G T A A G T C C G T A A T C G C G T A A C T G A C T G C G T A A G T C
Reverse Opposite:
A C T G A C G T A G T C A G T C A C G T A T G C C G A T C T A G A C G T A C T G A C T G A G T C A G T C
p-value:1e-11
log p-value:-2.553e+01
Information Content per bp:1.940
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.64%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets48.0 +/- 36.3bp
Average Position of motif in Background54.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX1/MA0002.2/Jaspar

Match Rank:1
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GGCCACAGAGGAC
AAACCACAGAN---
 A C G T C T A G A C T G A G T C A G T C C G T A A G T C C G T A A T C G C G T A A C T G A C T G C G T A A G T C
G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C A C G T A C G T A C G T

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GGCCACAGAGGAC
GTCCCCAGGGGA-
 C T A G A C T G A G T C A G T C C G T A A G T C C G T A A T C G C G T A A C T G A C T G C G T A A G T C
C A T G A C G T A G T C G A T C G A T C G A T C G C T A C T A G C T A G C T A G T C A G T C G A A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:3
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GGCCACAGAGGAC
NWAACCACADNN---
 A C G T A C G T C T A G A C T G A G T C A G T C C G T A A G T C C G T A A T C G C G T A A C T G A C T G C G T A A G T C
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C A C G T A C G T A C G T

VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer

Match Rank:4
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---GGCCACAGAGGAC----
NGAGGTCANNGAGTTCANNN
 A C G T A C G T A C G T C T A G A C T G A G T C A G T C C G T A A G T C C G T A A T C G C G T A A C T G A C T G C G T A A G T C A C G T A C G T A C G T A C G T
C T G A T C A G C T G A C T A G C A T G A C G T A T G C C G T A A T G C G C A T T C A G C T G A A C T G A C G T C A G T A G T C C G T A C A G T C T A G C A T G

Sox2/MA0143.3/Jaspar

Match Rank:5
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:GGCCACAGAGGAC
---AACAAAGG--
 C T A G A C T G A G T C A G T C C G T A A G T C C G T A A T C G C G T A A C T G A C T G C G T A A G T C
A C G T A C G T A C G T T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:6
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GGCCACAGAGGAC
AAACCACAGC----
 A C G T C T A G A C T G A G T C A G T C C G T A A G T C C G T A A T C G C G T A A C T G A C T G C G T A A G T C
G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C A C G T A C G T A C G T A C G T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:7
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:GGCCACAGAGGAC---
----ACAAAGGNBCCT
 C T A G A C T G A G T C A G T C C G T A A G T C C G T A A T C G C G T A A C T G A C T G C G T A A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:8
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--GGCCACAGAGGAC
NAAACCACAG-----
 A C G T A C G T C T A G A C T G A G T C A G T C C G T A A G T C C G T A A T C G C G T A A C T G A C T G C G T A A G T C
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T A C G T A C G T A C G T A C G T

THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer

Match Rank:9
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GGCCACAGAGGAC-
TGWCCTCARNTGACC
 A C G T C T A G A C T G A G T C A G T C C G T A A G T C C G T A A T C G C G T A A C T G A C T G C G T A A G T C A C G T
G C A T T A C G C G T A G T A C A G T C G A C T A G T C T C G A T C A G T C G A C G A T T C A G T G C A G T A C G A T C

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:10
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-GGCCACAGAGGAC
AAACCACANN----
 A C G T C T A G A C T G A G T C A G T C C G T A A G T C C G T A A T C G C G T A A C T G A C T G C G T A A G T C
G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A A C G T A C G T A C G T A C G T