Information for 5-DAGAAACTGDTTTTCA (Motif 6)

C A G T C G T A A T C G C G T A G T C A C T G A A T G C A C G T A C T G C A G T C G A T A G C T A C G T A C G T A G T C C G T A
Reverse Opposite:
A C G T A C T G C G T A C G T A C T G A C G T A G C T A A G T C C G T A A T C G G A C T A C G T A C G T A T G C A C G T G C T A
p-value:1e-11
log p-value:-2.732e+01
Information Content per bp:1.797
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.77%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets22.8 +/- 4.9bp
Average Position of motif in Background50.7 +/- 19.8bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer

Match Rank:1
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-DAGAAACTGDTTTTCA
GAACADWATGTTCTT--
 A C G T C A G T C G T A A T C G C G T A G T C A C T G A A T G C A C G T A C T G C A G T C G A T A G C T A C G T A C G T A G T C C G T A
C T A G C G T A C G T A A G T C C G T A C A G T C G T A G T C A C G A T A C T G A C G T G C A T A G T C G A C T G C A T A C G T A C G T

GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-DAGAAACTGDTTTTCA
GRACAGWMTGTYCTB--
 A C G T C A G T C G T A A T C G C G T A G T C A C T G A A T G C A C G T A C T G C A G T C G A T A G C T A C G T A C G T A G T C C G T A
C T A G C T G A C T G A T A G C C G T A A T C G C G T A T G C A G A C T T C A G G C A T G A C T G A T C G A C T A C T G A C G T A C G T

GRHL1/MA0647.1/Jaspar

Match Rank:3
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:DAGAAACTGDTTTTCA
--NAAACCGGTTTT--
 C A G T C G T A A T C G C G T A G T C A C T G A A T G C A C G T A C T G C A G T C G A T A G C T A C G T A C G T A G T C C G T A
A C G T A C G T G C T A C G T A C T G A C G T A A T G C G A T C C A T G A C T G G C A T G A C T G C A T C A G T A C G T A C G T

PH0017.1_Cux1_2/Jaspar

Match Rank:4
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:DAGAAACTGDTTTTCA---
----TAGTGATCATCATTA
 C A G T C G T A A T C G C G T A G T C A C T G A A T G C A C G T A C T G C A G T C G A T A G C T A C G T A C G T A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A C T G C T A C A T G A G C T C A T G G C T A C G A T G A T C C G T A C A G T G A T C T C G A A G C T A C G T G C T A

ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:5
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--DAGAAACTGDTTTTCA
AGNACAGNCTGTTCTN--
 A C G T A C G T C A G T C G T A A T C G C G T A G T C A C T G A A T G C A C G T A C T G C A G T C G A T A G C T A C G T A C G T A G T C C G T A
C T G A C T A G T C G A C G T A A T G C C G T A A T C G C G A T T A G C G C A T A T C G G C A T A G C T G A T C G A C T A G C T A C G T A C G T

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:6
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-DAGAAACTGDTTTTCA
GVACAGNMTGTYCTB--
 A C G T C A G T C G T A A T C G C G T A G T C A C T G A A T G C A C G T A C T G C A G T C G A T A G C T A C G T A C G T A G T C C G T A
C T A G T C G A C G T A T A G C C G T A C A T G C G T A T G A C G C A T T A C G G A C T A G C T G A T C G A C T A C T G A C G T A C G T

POL002.1_INR/Jaspar

Match Rank:7
Score:0.48
Offset:2
Orientation:reverse strand
Alignment:DAGAAACTGDTTTTCA
--NNNANTGA------
 C A G T C G T A A T C G C G T A G T C A C T G A A T G C A C G T A C T G C A G T C G A T A G C T A C G T A C G T A G T C C G T A
A C G T A C G T T C G A T C G A C T A G C T G A T A G C C G A T A C T G G T C A A C G T A C G T A C G T A C G T A C G T A C G T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:8
Score:0.48
Offset:8
Orientation:forward strand
Alignment:DAGAAACTGDTTTTCA--
--------CGGTTTCAAA
 C A G T C G T A A T C G C G T A G T C A C T G A A T G C A C G T A C T G C A G T C G A T A G C T A C G T A C G T A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A

NR4A2/MA0160.1/Jaspar

Match Rank:9
Score:0.47
Offset:6
Orientation:reverse strand
Alignment:DAGAAACTGDTTTTCA
------GTGACCTT--
 C A G T C G T A A T C G C G T A G T C A C T G A A T G C A C G T A C T G C A G T C G A T A G C T A C G T A C G T A G T C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T A C G T A C G T

NR3C2/MA0727.1/Jaspar

Match Rank:10
Score:0.47
Offset:-3
Orientation:forward strand
Alignment:---DAGAAACTGDTTTTCA
GGGAACACAATGTTCCC--
 A C G T A C G T A C G T C A G T C G T A A T C G C G T A G T C A C T G A A T G C A C G T A C T G C A G T C G A T A G C T A C G T A C G T A G T C C G T A
C A T G C T A G C A T G C G T A T G C A A T G C C T G A G A T C C G T A C T G A G A C T A T C G G A C T G C A T G A T C A G T C G T A C A C G T A C G T