Information for 6-CGGGTTTCTR (Motif 36)

G T A C C A T G A C T G A C T G C G A T A C G T A G C T A G T C C A G T C T G A
Reverse Opposite:
G A C T G T C A T C A G T C G A G T C A G C T A T G A C G T A C G T A C A C T G
p-value:1e-7
log p-value:-1.832e+01
Information Content per bp:1.637
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.67%
Number of Background Sequences with motif98.3
Percentage of Background Sequences with motif0.20%
Average Position of motif in Targets62.6 +/- 32.3bp
Average Position of motif in Background51.1 +/- 28.5bp
Strand Bias (log2 ratio + to - strand density)1.9
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFCP2/MA0145.3/Jaspar

Match Rank:1
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CGGGTTTCTR
AAACCGGTTT---
 A C G T A C G T A C G T G T A C C A T G A C T G A C T G C G A T A C G T A G C T A G T C C A G T C T G A
C T G A C T G A C G T A A T G C G A T C C T A G A T C G G C A T G C A T A G C T A C G T A C G T A C G T

GRHL1/MA0647.1/Jaspar

Match Rank:2
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----CGGGTTTCTR
NAAACCGGTTTT--
 A C G T A C G T A C G T A C G T G T A C C A T G A C T G A C T G C G A T A C G T A G C T A G T C C A G T C T G A
G C T A C G T A C T G A C G T A A T G C G A T C C A T G A C T G G C A T G A C T G C A T C A G T A C G T A C G T

PB0136.1_IRC900814_2/Jaspar

Match Rank:3
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----CGGGTTTCTR-
TTTTACGACTTTCCAT
 A C G T A C G T A C G T A C G T A C G T G T A C C A T G A C T G A C T G C G A T A C G T A G C T A G T C C A G T C T G A A C G T
C G A T A G C T G C A T A G C T T C G A G A T C C T A G C T G A G T A C C A G T A G C T G A C T G A T C T G A C T C G A G A C T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CGGGTTTCTR-
-TGGTTTCAGT
 G T A C C A T G A C T G A C T G C G A T A C G T A G C T A G T C C A G T C T G A A C G T
A C G T G A C T C T A G T A C G C G A T G C A T A C G T T A G C T C G A A T C G C G A T

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:5
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CGGGTTTCTR---
-AGGTCTCTAACC
 G T A C C A T G A C T G A C T G C G A T A C G T A G C T A G T C C A G T C T G A A C G T A C G T A C G T
A C G T C T G A T C A G A C T G C A G T A G T C G A C T A G T C A C G T C G T A G C T A A T G C G A T C

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:6
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CGGGTTTCTR---
-DGWTTTATGRCN
 G T A C C A T G A C T G A C T G C G A T A C G T A G C T A G T C C A G T C T G A A C G T A C G T A C G T
A C G T C A G T C A T G G C A T C G A T C G A T C G A T C T G A A G C T C A T G C T A G A G T C A T G C

PB0034.1_Irf4_1/Jaspar

Match Rank:7
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-CGGGTTTCTR----
TNTGGTTTCGATACN
 A C G T G T A C C A T G A C T G A C T G C G A T A C G T A G C T A G T C C A G T C T G A A C G T A C G T A C G T A C G T
G C A T A C G T G A C T C T A G A T C G C G A T C G A T A C G T A G T C C T A G C T G A G C A T G C T A G A T C A C T G

POL012.1_TATA-Box/Jaspar

Match Rank:8
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--CGGGTTTCTR---
NNNNNNCTTTTATAN
 A C G T A C G T G T A C C A T G A C T G A C T G C G A T A C G T A G C T A G T C C A G T C T G A A C G T A C G T A C G T
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C

TBP/MA0108.2/Jaspar

Match Rank:9
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--CGGGTTTCTR---
NNNNNNCTTTTATAN
 A C G T A C G T G T A C C A T G A C T G A C T G C G A T A C G T A G C T A G T C C A G T C T G A A C G T A C G T A C G T
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C

PB0182.1_Srf_2/Jaspar

Match Rank:10
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--CGGGTTTCTR-----
NNNNTTTTTTTTTNAAC
 A C G T A C G T G T A C C A T G A C T G A C T G C G A T A C G T A G C T A G T C C A G T C T G A A C G T A C G T A C G T A C G T A C G T
C G A T C G T A T C G A A C G T C A G T C A G T C A G T C G A T A C G T A C G T A C G T G A C T G A C T G C A T G C T A T G C A A T G C