Information for 14-CTCCTACTTTGCTCTG (Motif 29)

A T G C C A G T A G T C A G T C G A C T C G T A A T G C A G C T A G C T C A G T C A T G G T A C A C G T A T G C A G C T A C T G
Reverse Opposite:
T G A C T C G A T A C G T G C A A C T G G A T C G T C A T C G A C T G A A T C G G A C T C T G A C T A G A C T G G C T A A T C G
p-value:1e-8
log p-value:-1.967e+01
Information Content per bp:1.665
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.80%
Number of Background Sequences with motif105.6
Percentage of Background Sequences with motif0.22%
Average Position of motif in Targets43.2 +/- 21.5bp
Average Position of motif in Background51.6 +/- 28.7bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0207.1_Zic3_2/Jaspar

Match Rank:1
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CTCCTACTTTGCTCTG
NNTCCTGCTGTGNNN--
 A C G T A T G C C A G T A G T C A G T C G A C T C G T A A T G C A G C T A G C T C A G T C A T G G T A C A C G T A T G C A G C T A C T G
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:2
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---CTCCTACTTTGCTCTG
GGCCYCCTGCTGDGH----
 A C G T A C G T A C G T A T G C C A G T A G T C A G T C G A C T C G T A A T G C A G C T A G C T C A G T C A T G G T A C A C G T A T G C A G C T A C T G
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C A C G T A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CTCCTACTTTGCTCTG
CCCCCTGCTGTG-----
 A C G T A T G C C A G T A G T C A G T C G A C T C G T A A T G C A G C T A G C T C A G T C A T G G T A C A C G T A T G C A G C T A C T G
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T A C G T A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:4
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CTCCTACTTTGCTCTG
TNTCCTGCTGTGNNG--
 A C G T A T G C C A G T A G T C A G T C G A C T C G T A A T G C A G C T A G C T C A G T C A T G G T A C A C G T A T G C A G C T A C T G
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G A C G T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:5
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CTCCTACTTTGCTCTG
TCNCCTGCTGNGNNN--
 A C G T A T G C C A G T A G T C A G T C G A C T C G T A A T G C A G C T A G C T C A G T C A T G G T A C A C G T A T G C A G C T A C T G
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G A C G T A C G T

PB0114.1_Egr1_2/Jaspar

Match Rank:6
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---CTCCTACTTTGCTCTG
NNAGTCCCACTCNNNN---
 A C G T A C G T A C G T A T G C C A G T A G T C A G T C G A C T C G T A A T G C A G C T A G C T C A G T C A T G G T A C A C G T A T G C A G C T A C T G
T G A C G A T C C G T A C T A G G C A T G T A C G A T C G A T C G T C A A G T C A G C T G A T C T A G C C T A G T G A C T G C A A C G T A C G T A C G T

PH0098.1_Lhx8/Jaspar

Match Rank:7
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-CTCCTACTTTGCTCTG
ACCCCTAATTAGCGGTG
 A C G T A T G C C A G T A G T C A G T C G A C T C G T A A T G C A G C T A G C T C A G T C A T G G T A C A C G T A T G C A G C T A C T G
G C T A T G A C T G A C T G A C T G A C G A C T T C G A C T G A A G C T A G C T C T G A A C T G A G T C C A T G C A T G A C G T C T A G

Tcf7/MA0769.1/Jaspar

Match Rank:8
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:CTCCTACTTTGCTCTG-
-----CCTTTGATCTTT
 A T G C C A G T A G T C A G T C G A C T C G T A A T G C A G C T A G C T C A G T C A T G G T A C A C G T A T G C A G C T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G A T A G C T G C A T A T C G T G C A G C A T T A G C G C A T G A C T G A C T

POL013.1_MED-1/Jaspar

Match Rank:9
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-CTCCTACTTTGCTCTG
GCTCCG-----------
 A C G T A T G C C A G T A G T C A G T C G A C T C G T A A T G C A G C T A G C T C A G T C A T G G T A C A C G T A T G C A G C T A C T G
A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

E2F6/MA0471.1/Jaspar

Match Rank:10
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--CTCCTACTTTGCTCTG
NCTTCCCGCCC-------
 A C G T A C G T A T G C C A G T A G T C A G T C G A C T C G T A A T G C A G C T A G C T C A G T C A T G G T A C A C G T A T G C A G C T A C T G
A G T C A G T C A G C T A C G T A T G C A G T C A G T C C A T G A G T C A G T C G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T