Information for 12-TCCCGTCTGCGGABGC (Motif 27)

A G C T A G T C A T G C T G A C A C T G A C G T A T G C A C G T A T C G A T G C A C T G A C T G G T C A A G T C A C T G A G T C
Reverse Opposite:
A C T G A G T C T A C G A C G T A G T C A G T C A T C G A T G C G T C A A T C G G T C A A G T C A C T G A T C G A C T G C T G A
p-value:1e-8
log p-value:-1.977e+01
Information Content per bp:1.804
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.51%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets32.2 +/- 15.2bp
Average Position of motif in Background30.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TCCCGTCTGCGGABGC
VBSYGTCTGG------
 A G C T A G T C A T G C T G A C A C T G A C G T A T G C A C G T A T C G A T G C A C T G A C T G G T C A A G T C A C T G A G T C
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.59
Offset:2
Orientation:forward strand
Alignment:TCCCGTCTGCGGABGC
--CTGTCTGG------
 A G C T A G T C A T G C T G A C A C T G A C G T A T G C A C G T A T C G A T G C A C T G A C T G G T C A A G T C A C T G A G T C
A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T A C G T A C G T A C G T

HINFP/MA0131.2/Jaspar

Match Rank:3
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:TCCCGTCTGCGGABGC--
------NCGCGGACGTTG
 A G C T A G T C A T G C T G A C A C T G A C G T A T G C A C G T A T C G A T G C A C T G A C T G G T C A A G T C A C T G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T G A C G T A C T A C G T A G C C T A G A T C G C G T A T A G C T A C G A G C T A C G T T A C G

PB0060.1_Smad3_1/Jaspar

Match Rank:4
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--TCCCGTCTGCGGABGC
NNTNNTGTCTGGNNTNG-
 A C G T A C G T A G C T A G T C A T G C T G A C A C T G A C G T A T G C A C G T A T C G A T G C A C T G A C T G G T C A A G T C A C T G A G T C
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G A C G T

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:5
Score:0.50
Offset:6
Orientation:forward strand
Alignment:TCCCGTCTGCGGABGC--
------CTGCGCATGCGC
 A G C T A G T C A T G C T G A C A C T G A C G T A T G C A C G T A T C G A T G C A C T G A C T G G T C A A G T C A C T G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G C T T C A G T G A C T C A G A T G C T G C A A C G T A T C G G A T C A C T G A G T C

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:6
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:TCCCGTCTGCGGABGC
---TGCCTGAGGCN--
 A G C T A G T C A T G C T G A C A C T G A C G T A T G C A C G T A T C G A T G C A C T G A C T G G T C A A G T C A C T G A G T C
A C G T A C G T A C G T G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A G T A C G T A C G T

ZBTB7A/MA0750.1/Jaspar

Match Rank:7
Score:0.49
Offset:5
Orientation:reverse strand
Alignment:TCCCGTCTGCGGABGC-
-----TCGGTGGTCGCN
 A G C T A G T C A T G C T G A C A C T G A C G T A T G C A C G T A T C G A T G C A C T G A C T G G T C A A G T C A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G T A C C A T G A C T G C A G T T A C G C T A G C A G T A G T C A T C G A G T C T G A C

INSM1/MA0155.1/Jaspar

Match Rank:8
Score:0.49
Offset:3
Orientation:forward strand
Alignment:TCCCGTCTGCGGABGC
---TGTCAGGGGGCG-
 A G C T A G T C A T G C T G A C A C T G A C G T A T G C A C G T A T C G A T G C A C T G A C T G G T C A A G T C A C T G A G T C
A C G T A C G T A C G T C A G T A C T G A G C T G T A C C G T A A C T G A T C G A C T G A C T G A C T G G A T C C T A G A C G T

TFAP2A/MA0003.3/Jaspar

Match Rank:9
Score:0.49
Offset:3
Orientation:reverse strand
Alignment:TCCCGTCTGCGGABGC
---NGCCTGAGGCN--
 A G C T A G T C A T G C T G A C A C T G A C G T A T G C A C G T A T C G A T G C A C T G A C T G G T C A A G T C A C T G A G T C
A C G T A C G T A C G T G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A T G A C G T A C G T

ZBTB7C/MA0695.1/Jaspar

Match Rank:10
Score:0.48
Offset:4
Orientation:reverse strand
Alignment:TCCCGTCTGCGGABGC
----NTCGGTGGTCGC
 A G C T A G T C A T G C T G A C A C T G A C G T A T G C A C G T A T C G A T G C A C T G A C T G G T C A A G T C A C T G A G T C
A C G T A C G T A C G T A C G T A C G T C A G T A G T C C A T G C A T G C A G T T C A G A C T G C A G T G A T C A T C G G A T C