Information for 3-CTACGAGTGT (Motif 19)

A G T C A G C T C G T A A T G C A T C G C G T A A C T G G A C T A C T G A G C T
Reverse Opposite:
C T G A A G T C C G T A A G T C A C G T A T G C A T C G A C G T C T G A A C T G
p-value:1e-9
log p-value:-2.091e+01
Information Content per bp:1.871
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.03%
Number of Background Sequences with motif18.6
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets63.1 +/- 26.3bp
Average Position of motif in Background58.6 +/- 25.3bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0195.1_Zbtb3_2/Jaspar

Match Rank:1
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CTACGAGTGT---
NNNNTGCCAGTGATTG
 A C G T A C G T A C G T A G T C A G C T C G T A A T G C A T C G C G T A A C T G G A C T A C T G A G C T A C G T A C G T A C G T
G C T A G C A T C G A T G A T C G A C T T C A G T G A C T A G C C G T A A C T G A G C T C A T G C G T A A G C T C G A T T C A G

NKX2-8/MA0673.1/Jaspar

Match Rank:2
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CTACGAGTGT
-NTCAAGTGG
 A G T C A G C T C G T A A T G C A T C G C G T A A C T G G A C T A C T G A G C T
A C G T A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G

PH0048.1_Hoxa13/Jaspar

Match Rank:3
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----CTACGAGTGT-
ANATTTTACGAGNNNN
 A C G T A C G T A C G T A C G T A C G T A G T C A G C T C G T A A T G C A T C G C G T A A C T G G A C T A C T G A G C T A C G T
G C T A T C G A C G T A C G A T C A G T C G A T C G A T C T G A A G T C C T A G C T G A A T C G T A C G C G A T G C A T C G A T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:4
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CTACGAGTGT--
--TTGAGTGSTT
 A G T C A G C T C G T A A T G C A T C G C G T A A C T G G A C T A C T G A G C T A C G T A C G T
A C G T A C G T G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T

HOXC13/MA0907.1/Jaspar

Match Rank:5
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CTACGAGTGT
NTTTTACGAGN--
 A C G T A C G T A C G T A G T C A G C T C G T A A T G C A T C G C G T A A C T G G A C T A C T G A G C T
C G A T C G A T C G A T C G A T G C A T G T C A A G T C C T A G T C G A A T C G T G A C A C G T A C G T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:6
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CTACGAGTGT-
-CTYRAGTGSY
 A G T C A G C T C G T A A T G C A T C G C G T A A C T G G A C T A C T G A G C T A C G T
A C G T A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C

PB0136.1_IRC900814_2/Jaspar

Match Rank:7
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--CTACGAGTGT----
TTTTACGACTTTCCAT
 A C G T A C G T A G T C A G C T C G T A A T G C A T C G C G T A A C T G G A C T A C T G A G C T A C G T A C G T A C G T A C G T
C G A T A G C T G C A T A G C T T C G A G A T C C T A G C T G A G T A C C A G T A G C T G A C T G A T C T G A C T C G A G A C T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:8
Score:0.54
Offset:2
Orientation:forward strand
Alignment:CTACGAGTGT--
--TTRAGTGSYK
 A G T C A G C T C G T A A T G C A T C G C G T A A C T G G A C T A C T G A G C T A C G T A C G T
A C G T A C G T A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T

PH0068.1_Hoxc13/Jaspar

Match Rank:9
Score:0.53
Offset:-5
Orientation:reverse strand
Alignment:-----CTACGAGTGT-
NAATTTTACGAGNTNN
 A C G T A C G T A C G T A C G T A C G T A G T C A G C T C G T A A T G C A T C G C G T A A C T G G A C T A C T G A G C T A C G T
G C T A C T G A C G T A C G A T C G A T C G A T C G A T C T G A G A T C C T A G C T G A A T C G T G A C C G A T C G A T C G A T

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:10
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--CTACGAGTGT
GGGTACGTGC--
 A C G T A C G T A G T C A G C T C G T A A T G C A T C G C G T A A C T G G A C T A C T G A G C T
C T A G A T C G T C A G C A G T C T G A A T G C A C T G A G C T A C T G G T A C A C G T A C G T