Information for 9-TGACCAGAATGGSTGG (Motif 18)

A G C T A T C G G C T A A G T C A G T C C G T A A C T G C T G A T C G A G A C T A C T G C T A G A T C G A C G T A C T G A T C G
Reverse Opposite:
A T G C A G T C C G T A A T G C A G T C G T A C C T G A A C G T G A C T G T A C G C A T T A C G A C T G C A G T A T G C T C G A
p-value:1e-9
log p-value:-2.091e+01
Information Content per bp:1.704
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.90%
Number of Background Sequences with motif11.6
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets55.6 +/- 29.3bp
Average Position of motif in Background58.1 +/- 29.4bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0167.1_Sox13_2/Jaspar

Match Rank:1
Score:0.60
Offset:5
Orientation:forward strand
Alignment:TGACCAGAATGGSTGG------
-----GTATTGGGTGGGTAATT
 A G C T A T C G G C T A A G T C A G T C C G T A A C T G C T G A T C G A G A C T A C T G C T A G A T C G A C G T A C T G A T C G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G C G A T C T G A G A C T A G C T C A T G C A T G C T A G G C A T A C T G C A T G C A T G C G A T G C T A G C A T G C A T C A G T

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:2
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TGACCAGAATGGSTGG
-GTCATGCHTGRCTGS
 A G C T A T C G G C T A A G T C A G T C C G T A A C T G C T G A T C G A G A C T A C T G C T A G A T C G A C G T A C T G A T C G
A C G T A C T G A G C T A G T C G T C A A G C T T C A G A T G C G A T C G C A T A T C G T C G A T A G C C G A T C A T G T A G C

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:3
Score:0.59
Offset:7
Orientation:forward strand
Alignment:TGACCAGAATGGSTGG---
-------CGTGGGTGGTCC
 A G C T A T C G G C T A A G T C A G T C C G T A A C T G C T G A T C G A G A C T A C T G C T A G A T C G A C G T A C T G A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A T C G G C A T C T A G A C T G T A C G C G A T T C A G C A T G A G C T T A G C G A T C

ZNF354C/MA0130.1/Jaspar

Match Rank:4
Score:0.54
Offset:12
Orientation:reverse strand
Alignment:TGACCAGAATGGSTGG--
------------GTGGAT
 A G C T A T C G G C T A A G T C A G T C C G T A A C T G C T G A T C G A G A C T A C T G C T A G A T C G A C G T A C T G A T C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A C G T A C T G A C T G C G T A A C G T

PB0164.1_Smad3_2/Jaspar

Match Rank:5
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:TGACCAGAATGGSTGG-----
----NAGANTGGCGGGGNGNA
 A G C T A T C G G C T A A G T C A G T C C G T A A C T G C T G A T C G A G A C T A C T G C T A G A T C G A C G T A C T G A T C G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:6
Score:0.53
Offset:5
Orientation:forward strand
Alignment:TGACCAGAATGGSTGG-
-----NGCGTGGGCGGR
 A G C T A T C G G C T A A G T C A G T C C G T A A C T G C T G A T C G A G A C T A C T G C T A G A T C G A C G T A C T G A T C G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A C G G A T C A C T G A C G T C T A G A C T G A C T G G A T C C T A G C A T G C T A G

ZBTB7C/MA0695.1/Jaspar

Match Rank:7
Score:0.52
Offset:8
Orientation:reverse strand
Alignment:TGACCAGAATGGSTGG----
--------NTCGGTGGTCGC
 A G C T A T C G G C T A A G T C A G T C C G T A A C T G C T G A T C G A G A C T A C T G C T A G A T C G A C G T A C T G A T C G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T A G T C C A T G C A T G C A G T T C A G A C T G C A G T G A T C A T C G G A T C

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.52
Offset:5
Orientation:forward strand
Alignment:TGACCAGAATGGSTGG
-----TGCGTGGGYG-
 A G C T A T C G G C T A A G T C A G T C C G T A A C T G C T G A T C G A G A C T A C T G C T A G A T C G A C G T A C T G A T C G
A C G T A C G T A C G T A C G T A C G T C A G T T C A G G A T C A C T G A C G T C T A G A C T G A C T G G A C T C T A G A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:9
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:TGACCAGAATGGSTGG-----
----NNTNNTGTCTGGNNTNG
 A G C T A T C G G C T A A G T C A G T C C G T A A C T G C T G A T C G A G A C T A C T G C T A G A T C G A C G T A C T G A T C G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

PB0029.1_Hic1_1/Jaspar

Match Rank:10
Score:0.52
Offset:6
Orientation:reverse strand
Alignment:TGACCAGAATGGSTGG------
------NGTAGGTTGGCATNNN
 A G C T A T C G G C T A A G T C A G T C C G T A A C T G C T G A T C G A G A C T A C T G C T A G A T C G A C G T A C T G A T C G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T