Information for 2-GGCCTTCGGA (Motif 15)

A C T G T C A G A G T C A G T C G A C T A G C T A G T C C T A G A T C G G T C A
Reverse Opposite:
C A G T A T G C G A T C T C A G T C G A C T G A A C T G T A C G A G T C T G A C
p-value:1e-9
log p-value:-2.199e+01
Information Content per bp:1.680
Number of Target Sequences with motif66.0
Percentage of Target Sequences with motif8.48%
Number of Background Sequences with motif1765.7
Percentage of Background Sequences with motif3.61%
Average Position of motif in Targets49.8 +/- 23.8bp
Average Position of motif in Background51.1 +/- 28.7bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.67
Offset:2
Orientation:forward strand
Alignment:GGCCTTCGGA
--GCTTCC--
 A C T G T C A G A G T C A G T C G A C T A G C T A G T C C T A G A T C G G T C A
A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---GGCCTTCGGA
CNAGGCCT-----
 A C G T A C G T A C G T A C T G T C A G A G T C A G T C G A C T A G C T A G T C C T A G A T C G G T C A
A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T A C G T A C G T A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:3
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GGCCTTCGGA
TGACCTTGAN-
 A C G T A C T G T C A G A G T C A G T C G A C T A G C T A G T C C T A G A T C G G T C A
G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A A C G T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:4
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GGCCTTCGGA-
TGCCTGAGGCN
 A C T G T C A G A G T C A G T C G A C T A G C T A G T C C T A G A T C G G T C A A C G T
G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GGCCTTCGGA
CTGACCTTTG--
 A C G T A C G T A C T G T C A G A G T C A G T C G A C T A G C T A G T C C T A G A T C G G T C A
A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G A C G T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:6
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---GGCCTTCGGA
BNTGDCCTTG---
 A C G T A C G T A C G T A C T G T C A G A G T C A G T C G A C T A G C T A G T C C T A G A T C G G T C A
A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T A C G T A C G T

HNF4G/MA0484.1/Jaspar

Match Rank:7
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GGCCTTCGGA----
TGGACTTTGNNCTCN
 A C G T A C T G T C A G A G T C A G T C G A C T A G C T A G T C C T A G A T C G G T C A A C G T A C G T A C G T A C G T
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:8
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GGCCTTCGGA-
NGCCTNAGGCN
 A C T G T C A G A G T C A G T C G A C T A G C T A G T C C T A G A T C G G T C A A C G T
G C A T A T C G A T G C A G T C A G C T A T C G T C G A T C A G A T C G A T G C C A G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:9
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---GGCCTTCGGA
CTAGGCCT-----
 A C G T A C G T A C G T A C T G T C A G A G T C A G T C G A C T A G C T A G T C C T A G A T C G G T C A
T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T A C G T A C G T A C G T A C G T

TFAP2A/MA0003.3/Jaspar

Match Rank:10
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GGCCTTCGGA-
NGCCTGAGGCN
 A C T G T C A G A G T C A G T C G A C T A G C T A G T C C T A G A T C G G T C A A C G T
G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A T G