Information for 4-ATGGSGAATGCAA (Motif 12)

C G T A A C G T A T C G A T C G T A C G C T A G C G T A T C G A A C G T A T C G A G T C G T C A G T C A
Reverse Opposite:
A C G T C A G T A C T G T A G C G T C A A C G T A C G T A G T C A T G C A T G C A T G C T G C A G A C T
p-value:1e-10
log p-value:-2.367e+01
Information Content per bp:1.714
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.41%
Number of Background Sequences with motif38.6
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets49.0 +/- 25.8bp
Average Position of motif in Background47.1 +/- 29.1bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:1
Score:0.61
Offset:5
Orientation:forward strand
Alignment:ATGGSGAATGCAA----
-----AGATGCAATCCC
 C G T A A C G T A T C G A T C G T A C G C T A G C G T A T C G A A C G T A T C G A G T C G T C A G T C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A C T A G C T G A A G C T A C T G G T A C G T C A T G C A A G C T T G A C T A G C A G T C

POU2F2/MA0507.1/Jaspar

Match Rank:2
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:ATGGSGAATGCAA-----
-----ATATGCAAATNNN
 C G T A A C G T A T C G A T C G T A C G C T A G C G T A T C G A A C G T A T C G A G T C G T C A G T C A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:3
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--ATGGSGAATGCAA
GGAGGGGGAA-----
 A C G T A C G T C G T A A C G T A T C G A T C G T A C G C T A G C G T A T C G A A C G T A T C G A G T C G T C A G T C A
A C T G C A G T G T C A A C T G A C T G A T C G A C T G C A T G C T G A C T G A A C G T A C G T A C G T A C G T A C G T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:ATGGSGAATGCAA--
-----TTATGCAAAT
 C G T A A C G T A T C G A T C G T A C G C T A G C G T A T C G A A C G T A T C G A G T C G T C A G T C A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T G C A T C T G A A C G T A C T G A G T C C G T A C T G A C G T A C G A T

Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:5
Score:0.57
Offset:0
Orientation:forward strand
Alignment:ATGGSGAATGCAA
ATGCATAATTCA-
 C G T A A C G T A T C G A T C G T A C G C T A G C G T A T C G A A C G T A T C G A G T C G T C A G T C A
G C T A C G A T C T A G G T A C G C T A C G A T C G T A G C T A C G A T C A G T G A T C G C T A A C G T

OCT:OCT-short(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer

Match Rank:6
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--ATGGSGAATGCAA
WYATGCATWATGCAT
 A C G T A C G T C G T A A C G T A T C G A T C G T A C G C T A G C G T A T C G A A C G T A T C G A G T C G T C A G T C A
C G T A A G C T C G T A A C G T A C T G G T A C C G T A A C G T C G A T C G T A A C G T A C T G A G T C C G T A C G A T

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.57
Offset:5
Orientation:forward strand
Alignment:ATGGSGAATGCAA--
-----ATATGCAAAT
 C G T A A C G T A T C G A T C G T A C G C T A G C G T A T C G A A C G T A T C G A G T C G T C A G T C A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G T C A G C A T G C T A C A G T C T A G G A T C C G T A C T G A C G T A C G A T

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:8
Score:0.56
Offset:1
Orientation:forward strand
Alignment:ATGGSGAATGCAA
-CCWGGAATGY--
 C G T A A C G T A T C G A T C G T A C G C T A G C G T A T C G A A C G T A T C G A G T C G T C A G T C A
A C G T T A G C T A G C G C A T C A T G A C T G G C T A C G T A A C G T A C T G G A T C A C G T A C G T

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:9
Score:0.56
Offset:6
Orientation:forward strand
Alignment:ATGGSGAATGCAA-----
------TATGCWAATBAV
 C G T A A C G T A T C G A T C G T A C G C T A G C G T A T C G A A C G T A T C G A G T C G T C A G T C A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T C G T A A C G T A C T G A G T C C G T A C T G A C G T A C A G T A C G T G T C A T C A G

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:10
Score:0.55
Offset:1
Orientation:forward strand
Alignment:ATGGSGAATGCAA
-GGGGGAATCCCC
 C G T A A C G T A T C G A T C G T A C G C T A G C G T A T C G A A C G T A T C G A G T C G T C A G T C A
A C G T T C A G C T A G C T A G C T A G T C A G T C G A C T G A C G A T A G T C G A T C A G T C T G A C