Information for 3-CTGGGCTCTTTCT (Motif 11)

A G T C C G A T A C T G A C T G A C T G G T A C A C G T A G T C A C G T A G C T A C G T A G T C A C G T
Reverse Opposite:
C G T A C T A G C G T A C T G A C G T A A C T G G T C A A C T G A G T C G T A C A G T C C G T A A C T G
p-value:1e-10
log p-value:-2.509e+01
Information Content per bp:1.896
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.90%
Number of Background Sequences with motif6.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets64.7 +/- 26.9bp
Average Position of motif in Background56.6 +/- 25.5bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:1
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--CTGGGCTCTTTCT
GYCTGGYYTNTGTCA
 A C G T A C G T A G T C C G A T A C T G A C T G A C T G G T A C A C G T A G T C A C G T A G C T A C G T A G T C A C G T
A T C G A G C T A G T C A C G T A C T G A T C G A G C T G A C T G C A T A G C T G A C T T A C G A G C T G A T C G C T A

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---CTGGGCTCTTTCT
WDNCTGGGCA------
 A C G T A C G T A C G T A G T C C G A T A C T G A C T G A C T G G T A C A C G T A G T C A C G T A G C T A C G T A G T C A C G T
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T A C G T A C G T A C G T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:3
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CTGGGCTCTTTCT
-AGGVNCCTTTGT
 A G T C C G A T A C T G A C T G A C T G G T A C A C G T A G T C A C G T A G C T A C G T A G T C A C G T
A C G T C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T

PB0137.1_Irf3_2/Jaspar

Match Rank:4
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CTGGGCTCTTTCT--
-NNGCACCTTTCTCC
 A G T C C G A T A C T G A C T G A C T G G T A C A C G T A G T C A C G T A G C T A C G T A G T C A C G T A C G T A C G T
A C G T A G C T G A T C T C A G T A G C G C T A A T G C T A G C G C A T C G A T G C A T G A T C G C A T G T A C G A T C

Tcf7/MA0769.1/Jaspar

Match Rank:5
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CTGGGCTCTTTCT
CCTTTGATCTTT--
 A C G T A G T C C G A T A C T G A C T G A C T G G T A C A C G T A G T C A C G T A G C T A C G T A G T C A C G T
A G T C A G T C C G A T A G C T G C A T A T C G T G C A G C A T T A G C G C A T G A C T G A C T A C G T A C G T

LEF1/MA0768.1/Jaspar

Match Rank:6
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----CTGGGCTCTTTCT
AACCCTTTGATCTTT--
 A C G T A C G T A C G T A C G T A G T C C G A T A C T G A C T G A C T G G T A C A C G T A G T C A C G T A G C T A C G T A G T C A C G T
C G T A G C T A A G T C A G T C A G T C G A C T A G C T C G A T A T C G C G T A G C A T A T G C G A C T G A C T A G C T A C G T A C G T

PB0099.1_Zfp691_1/Jaspar

Match Rank:7
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----CTGGGCTCTTTCT
CGAACAGTGCTCACTAT
 A C G T A C G T A C G T A C G T A G T C C G A T A C T G A C T G A C T G G T A C A C G T A G T C A C G T A G C T A C G T A G T C A C G T
A G T C C A T G G C T A T C G A G A T C T C G A A C T G C G A T C T A G G T A C A G C T A G T C T G C A A G T C G C A T C T G A C G A T

RBPJ:Ebox(?,bHLH)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:8
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---CTGGGCTCTTTCT-
CAKCTGKYCYYTTYCCC
 A C G T A C G T A C G T A G T C C G A T A C T G A C T G A C T G G T A C A C G T A G T C A C G T A G C T A C G T A G T C A C G T A C G T
T G A C G C T A A C G T T G A C C G A T A C T G A C T G A G T C A G T C A G T C A G C T A G C T A G C T A G C T G A T C T G A C G T A C

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:9
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:CTGGGCTCTTTCT
NRRGGGTCTT---
 A G T C C G A T A C T G A C T G A C T G G T A C A C G T A G T C A C G T A G C T A C G T A G T C A C G T
A C T G T C G A C T A G A C T G A C T G A C T G A C G T A G T C A C G T A G C T A C G T A C G T A C G T

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:CTGGGCTCTTTCT---
----KCTATTTTTRGH
 A G T C C G A T A C T G A C T G A C T G G T A C A C G T A G T C A C G T A G C T A C G T A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G A G T C G A C T C G T A C G A T G C A T G C A T G C A T C G A T C T G A C A T G G T A C