Information for 7-GCCTGRAYWTTKMTCW (Motif 10)

C T A G A T G C A G T C A C G T A C T G C T G A C T G A A G C T C G A T A C G T A C G T A C G T G T A C A C G T A G T C C G A T
Reverse Opposite:
C G T A A C T G C G T A A C T G G T C A C G T A C G T A C G T A C T G A A G C T G A C T A G T C C G T A A C T G A T C G A G T C
p-value:1e-11
log p-value:-2.553e+01
Information Content per bp:1.844
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.64%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets48.8 +/- 21.1bp
Average Position of motif in Background45.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:1
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:GCCTGRAYWTTKMTCW---
---TGGACTTTGNNCTNTG
 C T A G A T G C A G T C A C G T A C T G C T G A C T G A A G C T C G A T A C G T A C G T A C G T G T A C A C G T A G T C C G A T A C G T A C G T A C G T
A C G T A C G T A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G

HNF4G/MA0484.1/Jaspar

Match Rank:2
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:GCCTGRAYWTTKMTCW--
---TGGACTTTGNNCTCN
 C T A G A T G C A G T C A C G T A C T G C T G A C T G A A G C T C G A T A C G T A C G T A C G T G T A C A C G T A G T C C G A T A C G T A C G T
A C G T A C G T A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T

Hnf4a/MA0114.3/Jaspar

Match Rank:3
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GCCTGRAYWTTKMTCW-
-ATTGGACTTTGACCCC
 C T A G A T G C A G T C A C G T A C T G C T G A C T G A A G C T C G A T A C G T A C G T A C G T G T A C A C G T A G T C C G A T A C G T
A C G T C T G A A G C T G A C T T C A G T C A G T G C A T G A C A G C T G A C T A G C T T C A G G T C A G T A C G A T C A G T C A G T C

OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:4
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-GCCTGRAYWTTKMTCW
CTCATGAATATTCAT--
 A C G T C T A G A T G C A G T C A C G T A C T G C T G A C T G A A G C T C G A T A C G T A C G T A C G T G T A C A C G T A G T C C G A T
T A G C G A C T G A T C C G T A A C G T T C A G G T C A C G T A A C G T C G T A C G A T A C G T A G T C C G T A C G A T A C G T A C G T

PB0134.1_Hnf4a_2/Jaspar

Match Rank:5
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-GCCTGRAYWTTKMTCW
NNATTGGACTTTNGNN-
 A C G T C T A G A T G C A G T C A C G T A C T G C T G A C T G A A G C T C G A T A C G T A C G T A C G T G T A C A C G T A G T C C G A T
C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C A C G T

SOX8/MA0868.1/Jaspar

Match Rank:6
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--GCCTGRAYWTTKMTCW
AACACTGCACATTGTT--
 A C G T A C G T C T A G A T G C A G T C A C G T A C T G C T G A C T G A A G C T C G A T A C G T A C G T A C G T G T A C A C G T A G T C C G A T
C T G A C G T A A G T C G T C A G T A C A C G T T A C G T G A C C G T A G A T C G T C A A C G T A G C T A C T G A C G T C G A T A C G T A C G T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:7
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:GCCTGRAYWTTKMTCW-
---TGACCTTTGCCCTA
 C T A G A T G C A G T C A C G T A C T G C T G A C T G A A G C T C G A T A C G T A C G T A C G T G T A C A C G T A G T C C G A T A C G T
A C G T A C G T A C G T A G C T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G T G A C G A T C G A T C G A C T T C G A

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:GCCTGRAYWTTKMTCW
--CTGACCTTTG----
 C T A G A T G C A G T C A C G T A C T G C T G A C T G A A G C T C G A T A C G T A C G T A C G T G T A C A C G T A G T C C G A T
A C G T A C G T A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G A C G T A C G T A C G T A C G T

RXRG/MA0856.1/Jaspar

Match Rank:9
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:GCCTGRAYWTTKMTCW-
---TGACCTTTGACCCC
 C T A G A T G C A G T C A C G T A C T G C T G A C T G A A G C T C G A T A C G T A C G T A C G T G T A C A C G T A G T C C G A T A C G T
A C G T A C G T A C G T A G C T T C A G T G C A G T A C G T A C G A C T G A C T G A C T T C A G T G C A G T A C G T A C A G T C A G T C

PB0146.1_Mafk_2/Jaspar

Match Rank:10
Score:0.49
Offset:0
Orientation:reverse strand
Alignment:GCCTGRAYWTTKMTCW
CCTTGCAATTTTTNN-
 C T A G A T G C A G T C A C G T A C T G C T G A C T G A A G C T C G A T A C G T A C G T A C G T G T A C A C G T A G T C C G A T
A G T C T A G C C A G T A C G T C T A G G T A C C T G A G T C A C G A T C G A T G A C T G A C T A G C T C A G T A G T C A C G T