Information for 1-AADDGCTGGAAATGGA (Motif 3)

C G T A C G T A C G T A C A T G A C T G A G T C A C G T A C T G C T A G C G T A G T C A C G T A A C G T A C T G A C T G C G T A
Reverse Opposite:
A C G T A G T C A G T C G T C A A C G T A C G T A C G T A G T C A G T C C G T A A C T G G T A C G A T C G C A T A C G T C G A T
p-value:1e-10
log p-value:-2.527e+01
Information Content per bp:1.835
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.61%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets37.4 +/- 30.2bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0158.1_Rhox11_2/Jaspar

Match Rank:1
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AADDGCTGGAAATGGA
AGGACGCTGTAAAGGGA
 A C G T C G T A C G T A C G T A C A T G A C T G A G T C A C G T A C T G C T A G C G T A G T C A C G T A A C G T A C T G A C T G C G T A
C G T A T C A G C A T G G T C A G A T C C T A G T A G C C A G T C T A G G A C T G C T A C G T A G C T A C T A G T A C G T C A G G C T A

NFATC2/MA0152.1/Jaspar

Match Rank:2
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:AADDGCTGGAAATGGA
------TGGAAAA---
 C G T A C G T A C G T A C A T G A C T G A G T C A C G T A C T G C T A G C G T A G T C A C G T A A C G T A C T G A C T G C G T A
A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C T G A C T G C G T A C G T A T C G A G C T A A C G T A C G T A C G T

MEF2A/MA0052.3/Jaspar

Match Rank:3
Score:0.56
Offset:4
Orientation:forward strand
Alignment:AADDGCTGGAAATGGA
----TCTAAAAATAGA
 C G T A C G T A C G T A C A T G A C T G A G T C A C G T A C T G C T A G C G T A G T C A C G T A A C G T A C T G A C T G C G T A
A C G T A C G T A C G T A C G T C A G T G A T C A G C T G C T A C G T A G C T A C G T A G C T A A G C T G T C A C T A G G T C A

MEF2D/MA0773.1/Jaspar

Match Rank:4
Score:0.56
Offset:4
Orientation:forward strand
Alignment:AADDGCTGGAAATGGA
----ACTATAAATAGA
 C G T A C G T A C G T A C A T G A C T G A G T C A C G T A C T G C T A G C G T A G T C A C G T A A C G T A C T G A C T G C G T A
A C G T A C G T A C G T A C G T C T G A G A T C G A C T G T C A C G A T G C T A C G T A G C T A A C G T C T G A T C A G G T C A

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:5
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:AADDGCTGGAAATGGA
---NACAGGAAAT---
 C G T A C G T A C G T A C A T G A C T G A G T C A C G T A C T G C T A G C G T A G T C A C G T A A C G T A C T G A C T G C G T A
A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T A C G T A C G T

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:6
Score:0.55
Offset:5
Orientation:forward strand
Alignment:AADDGCTGGAAATGGA
-----CCAAAAATAG-
 C G T A C G T A C G T A C A T G A C T G A G T C A C G T A C T G C T A G C G T A G T C A C G T A A C G T A C T G A C T G C G T A
A C G T A C G T A C G T A C G T A C G T G T A C G A C T C G T A C T G A T C G A C G T A G C T A C A G T C T G A T A C G A C G T

SA0002.1_at_AC_acceptor/Jaspar

Match Rank:7
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:AADDGCTGGAAATGGA------
--NNCCTGNAAAAAAAAAAAAA
 C G T A C G T A C G T A C A T G A C T G A G T C A C G T A C T G C T A G C G T A G T C A C G T A A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G C T A C G T A A G T C A G T C A C G T C T A G C T G A C T G A C T G A C T G A C T G A T C G A T C G A T C G A T C G A C T G A C T G A C T G A T C G A C T G A

SA0001.1_at_AC_acceptor/Jaspar

Match Rank:8
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:AADDGCTGGAAATGGA------
--NNCCTGNAAAAAAAAAAAAA
 C G T A C G T A C G T A C A T G A C T G A G T C A C G T A C T G C T A G C G T A G T C A C G T A A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G C T A G C T A A G T C A G T C A C G T C T A G C T G A C T G A C T G A C T G A C T G A T C G A T C G A T C G A T C G A T C G A T C G A T C G A C T G A C T G A

Rhox11/MA0629.1/Jaspar

Match Rank:9
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-AADDGCTGGAAATGGA
AAGACGCTGTAAAGCGA
 A C G T C G T A C G T A C G T A C A T G A C T G A G T C A C G T A C T G C T A G C G T A G T C A C G T A A C G T A C T G A C T G C G T A
C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A

PH0157.1_Rhox11_1/Jaspar

Match Rank:10
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-AADDGCTGGAAATGGA
AAGACGCTGTAAAGCGA
 A C G T C G T A C G T A C G T A C A T G A C T G A G T C A C G T A C T G C T A G C G T A G T C A C G T A A C G T A C T G A C T G C G T A
C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A