Information for 2-RRACTMCAATTCCCAG (Motif 3)

C T G A T C G A C T G A T A G C G A C T T G A C T G A C G T C A C G T A A C G T C G A T A G T C G T A C A G T C C G T A T A C G
Reverse Opposite:
A T G C G C A T T A C G A C T G T C A G C G T A T G C A G C A T C A G T A C T G A C T G C T G A A T C G A G C T A G C T G A C T
p-value:1e-33
log p-value:-7.624e+01
Information Content per bp:1.557
Number of Target Sequences with motif71.0
Percentage of Target Sequences with motif8.02%
Number of Background Sequences with motif562.4
Percentage of Background Sequences with motif1.27%
Average Position of motif in Targets48.5 +/- 24.5bp
Average Position of motif in Background46.6 +/- 32.1bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GFY(?)/Promoter/Homer

Match Rank:1
Score:0.83
Offset:2
Orientation:forward strand
Alignment:RRACTMCAATTCCCAG
--ACTACAATTCCC--
 C T G A T C G A C T G A T A G C G A C T T G A C T G A C G T C A C G T A A C G T C G A T A G T C G T A C A G T C C G T A T A C G
A C G T A C G T T G C A T A G C G A C T T G C A T G A C T G C A C G T A A G C T A G C T A G T C A G T C G T A C A C G T A C G T

GFY-Staf(?,Zf)/Promoter/Homer

Match Rank:2
Score:0.80
Offset:1
Orientation:forward strand
Alignment:RRACTMCAATTCCCAG-----
-AACTACAATTCCCAGAATGC
 C T G A T C G A C T G A T A G C G A C T T G A C T G A C G T C A C G T A A C G T C G A T A G T C G T A C A G T C C G T A T A C G A C G T A C G T A C G T A C G T A C G T
A C G T T C G A C G T A A G T C A G C T C G T A A G T C T C G A G C T A G A C T C G A T A G T C A G T C A G T C C T G A T C A G T G C A T C G A C A G T A T C G A G T C

Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer

Match Rank:3
Score:0.79
Offset:1
Orientation:forward strand
Alignment:RRACTMCAATTCCCAG-----
-RACTACAACTCCCAGVAKGC
 C T G A T C G A C T G A T A G C G A C T T G A C T G A C G T C A C G T A A C G T C G A T A G T C G T A C A G T C C G T A T A C G A C G T A C G T A C G T A C G T A C G T
A C G T T C A G C G T A A G T C A G C T C G T A A G T C C T G A C G T A A G T C G C A T A G T C A G T C A G T C C T G A A C T G T G C A T C G A C A T G A T C G G A T C

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:4
Score:0.71
Offset:7
Orientation:forward strand
Alignment:RRACTMCAATTCCCAG-
-------HTTTCCCASG
 C T G A T C G A C T G A T A G C G A C T T G A C T G A C G T C A C G T A A C G T C G A T A G T C G T A C A G T C C G T A T A C G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.65
Offset:9
Orientation:reverse strand
Alignment:RRACTMCAATTCCCAG---
---------TGCCCAGNHW
 C T G A T C G A C T G A T A G C G A C T T G A C T G A C G T C A C G T A A C G T C G A T A G T C G T A C A G T C C G T A T A C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:6
Score:0.64
Offset:7
Orientation:forward strand
Alignment:RRACTMCAATTCCCAG------
-------ATTTCCCAGVAKSCY
 C T G A T C G A C T G A T A G C G A C T T G A C T G A C G T C A C G T A A C G T C G A T A G T C G T A C A G T C C G T A T A C G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A G C A T A G C T G C A T A G T C A G T C A G T C C T G A A C T G T C G A T C G A C A G T A T C G A G T C G A T C

STAT3/MA0144.2/Jaspar

Match Rank:7
Score:0.61
Offset:8
Orientation:reverse strand
Alignment:RRACTMCAATTCCCAG---
--------TTTCCCAGAAN
 C T G A T C G A C T G A T A G C G A C T T G A C T G A C G T C A C G T A A C G T C G A T A G T C G T A C A G T C C G T A T A C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T A C G T A C G T G A T C A G T C G T A C C T G A C T A G T G C A C G T A T C A G

NFATC2/MA0152.1/Jaspar

Match Rank:8
Score:0.60
Offset:8
Orientation:forward strand
Alignment:RRACTMCAATTCCCAG
--------TTTTCCA-
 C T G A T C G A C T G A T A G C G A C T T G A C T G A C G T C A C G T A A C G T C G A T A G T C G T A C A G T C C G T A T A C G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C G T G A C T A C G T G T A C A G T C G C T A A C G T

NFATC1/MA0624.1/Jaspar

Match Rank:9
Score:0.59
Offset:7
Orientation:forward strand
Alignment:RRACTMCAATTCCCAG-
-------ATTTTCCATT
 C T G A T C G A C T G A T A G C G A C T T G A C T G A C G T C A C G T A A C G T C G A T A G T C G T A C A G T C C G T A T A C G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A G C A T C G A T G A C T G A C T T G A C G A T C C T G A G A C T G C A T

NFAT5/MA0606.1/Jaspar

Match Rank:10
Score:0.59
Offset:7
Orientation:forward strand
Alignment:RRACTMCAATTCCCAG-
-------ATTTTCCATT
 C T G A T C G A C T G A T A G C G A C T T G A C T G A C G T C A C G T A A C G T C G A T A G T C G T A C A G T C C G T A T A C G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G A T A C G T A C G T G C A T A G T C A G T C G C T A G A C T C G A T