Information for 11-GGAGCGGCGCGAGGGC (Motif 27)

C T A G A T C G T G C A A C T G A T G C A T C G A T C G A T G C A C T G A T G C A C T G T C G A C T A G A C T G T C A G G T A C
Reverse Opposite:
A C T G A G T C G T A C A G T C A G C T G T A C A T C G A G T C A T C G A T G C A T G C T A C G A G T C A C G T A T G C A G T C
p-value:1e-7
log p-value:-1.768e+01
Information Content per bp:1.762
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.13%
Number of Background Sequences with motif42.6
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets56.4 +/- 21.3bp
Average Position of motif in Background54.9 +/- 37.4bp
Strand Bias (log2 ratio + to - strand density)-1.4
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sp1(Zf)/Promoter/Homer

Match Rank:1
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-GGAGCGGCGCGAGGGC
GGGGGCGGGGCC-----
 A C G T C T A G A T C G T G C A A C T G A T G C A T C G A T C G A T G C A C T G A T G C A C T G T C G A C T A G A C T G T C A G G T A C
T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C A C G T A C G T A C G T A C G T A C G T

PB0202.1_Zfp410_2/Jaspar

Match Rank:2
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----GGAGCGGCGCGAGGGC
NNTNNGGGGCGGNGNGN----
 A C G T A C G T A C G T A C G T A C G T C T A G A T C G T G C A A C T G A T G C A T C G A T C G A T G C A C T G A T G C A C T G T C G A C T A G A C T G T C A G G T A C
C G T A C T G A C A G T C G A T G C A T T A C G A C T G T A C G A C T G T G A C T C A G C T A G C T A G C T A G C A G T C T A G T C G A A C G T A C G T A C G T A C G T

SP1/MA0079.3/Jaspar

Match Rank:3
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GGAGCGGCGCGAGGGC
GGGGGCGGGGC------
 A C G T C T A G A T C G T G C A A C T G A T G C A T C G A T C G A T G C A C T G A T G C A C T G T C G A C T A G A C T G T C A G G T A C
T C A G C T A G C T A G A C T G A C T G G T A C C T A G A C T G C T A G T C A G T G A C A C G T A C G T A C G T A C G T A C G T A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:4
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GGAGCGGCGCGAGGGC
RGKGGGCGGAGC------
 A C G T A C G T C T A G A T C G T G C A A C T G A T G C A T C G A T C G A T G C A C T G A T G C A C T G T C G A C T A G A C T G T C A G G T A C
C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C A C G T A C G T A C G T A C G T A C G T A C G T

SP2/MA0516.1/Jaspar

Match Rank:5
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----GGAGCGGCGCGAGGGC
GGGNGGGGGCGGGGC------
 A C G T A C G T A C G T A C G T A C G T C T A G A T C G T G C A A C T G A T G C A T C G A T C G A T G C A C T G A T G C A C T G T C G A C T A G A C T G T C A G G T A C
T A C G T A C G T A C G T C G A C T A G C T A G C T A G C T A G A C T G G T A C C T A G A T C G C T A G T C A G T A G C A C G T A C G T A C G T A C G T A C G T A C G T

POL003.1_GC-box/Jaspar

Match Rank:6
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GGAGCGGCGCGAGGGC
AGGGGGCGGGGCTG----
 A C G T A C G T C T A G A T C G T G C A A C T G A T G C A T C G A T C G A T G C A C T G A T G C A C T G T C G A C T A G A C T G T C A G G T A C
C G T A C T A G C A T G T C A G A C T G C T A G G T A C C T A G A C T G C T A G C A T G A G T C A G C T C A T G A C G T A C G T A C G T A C G T

KLF5/MA0599.1/Jaspar

Match Rank:7
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GGAGCGGCGCGAGGGC
GGGGNGGGGC------
 C T A G A T C G T G C A A C T G A T G C A T C G A T C G A T G C A C T G A T G C A C T G T C G A C T A G A C T G T C A G G T A C
C T A G C T A G A C T G A C T G G A T C A C T G C A T G C T A G C T A G T G A C A C G T A C G T A C G T A C G T A C G T A C G T

PB0110.1_Bcl6b_2/Jaspar

Match Rank:8
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----GGAGCGGCGCGAGGGC
NNTNAGGGGCGGNNNN-----
 A C G T A C G T A C G T A C G T A C G T C T A G A T C G T G C A A C T G A T G C A T C G A T C G A T G C A C T G A T G C A C T G T C G A C T A G A C T G T C A G G T A C
A C G T C G A T C A G T C A G T G C T A T A C G T A C G A C T G C A T G G A T C C T A G C T A G T A C G T A C G T C G A C A G T A C G T A C G T A C G T A C G T A C G T

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:9
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---GGAGCGGCGCGAGGGC
NNVDGGGYGGGGCYN----
 A C G T A C G T A C G T C T A G A T C G T G C A A C T G A T G C A T C G A T C G A T G C A C T G A T G C A C T G T C G A C T A G A C T G T C A G G T A C
T A C G T G A C T C A G C T G A A C T G A C T G A C T G A G C T A C T G A C T G C T A G A C T G A G T C A G T C C T G A A C G T A C G T A C G T A C G T

PB0164.1_Smad3_2/Jaspar

Match Rank:10
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GGAGCGGCGCGAGGGC
NAGANTGGCGGGGNGNA
 A C G T C T A G A T C G T G C A A C T G A T G C A T C G A T C G A T G C A C T G A T G C A C T G T C G A C T A G A C T G T C A G G T A C
T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A