Information for 7-CGATTGGCTG (Motif 8)

A G T C A T C G T G C A C G A T G C A T A T C G A T C G A G T C G A C T A C T G
Reverse Opposite:
T A G C C T G A A C T G A T G C T A G C C G T A G C T A A C G T T A G C T C A G
p-value:1e-15
log p-value:-3.609e+01
Information Content per bp:1.681
Number of Target Sequences with motif60.0
Percentage of Target Sequences with motif6.84%
Number of Background Sequences with motif213.7
Percentage of Background Sequences with motif1.96%
Average Position of motif in Targets49.4 +/- 26.6bp
Average Position of motif in Background49.9 +/- 29.0bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFY(CCAAT)/Promoter/Homer

Match Rank:1
Score:0.84
Offset:-1
Orientation:reverse strand
Alignment:-CGATTGGCTG
CCGATTGGCT-
 A C G T A G T C A T C G T G C A C G A T G C A T A T C G A T C G A G T C G A C T A C T G
A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T A C G T

POL004.1_CCAAT-box/Jaspar

Match Rank:2
Score:0.81
Offset:0
Orientation:reverse strand
Alignment:CGATTGGCTG--
TGATTGGCTANN
 A G T C A T C G T G C A C G A T G C A T A T C G A T C G A G T C G A C T A C T G A C G T A C G T
A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

NFYB/MA0502.1/Jaspar

Match Rank:3
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-CGATTGGCTG----
CTGATTGGTCNATTT
 A C G T A G T C A T C G T G C A C G A T G C A T A T C G A T C G A G T C G A C T A C T G A C G T A C G T A C G T A C G T
A T G C A G C T A T C G C G T A A G C T A C G T A C T G A C T G G A C T A G T C T A G C T C G A C A G T C A G T A G C T

NFIC/MA0161.1/Jaspar

Match Rank:4
Score:0.72
Offset:3
Orientation:forward strand
Alignment:CGATTGGCTG
---TTGGCA-
 A G T C A T C G T G C A C G A T G C A T A T C G A T C G A G T C G A C T A C T G
A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T

NFIX/MA0671.1/Jaspar

Match Rank:5
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:CGATTGGCTG-
--NTTGGCANN
 A G T C A T C G T G C A C G A T G C A T A T C G A T C G A G T C G A C T A C T G A C G T
A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:6
Score:0.69
Offset:3
Orientation:forward strand
Alignment:CGATTGGCTG-
---TWGTCTGV
 A G T C A T C G T G C A C G A T G C A T A T C G A T C G A G T C G A C T A C T G A C G T
A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G

POL010.1_DCE_S_III/Jaspar

Match Rank:7
Score:0.69
Offset:5
Orientation:reverse strand
Alignment:CGATTGGCTG
-----NGCTN
 A G T C A T C G T G C A C G A T G C A T A T C G A T C G A G T C G A C T A C T G
A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G

NFYA/MA0060.2/Jaspar

Match Rank:8
Score:0.63
Offset:-7
Orientation:forward strand
Alignment:-------CGATTGGCTG-
AGAGTGCTGATTGGTCCA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A T C G T G C A C G A T G C A T A T C G A T C G A G T C G A C T A C T G A C G T
G C T A C A T G T G C A T A C G G A C T A C T G A G T C A G C T A T C G C T G A A G C T C G A T T C A G T A C G G A C T A G T C T A G C T C G A

NFIA/MA0670.1/Jaspar

Match Rank:9
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CGATTGGCTG-
-NNTTGGCANN
 A G T C A T C G T G C A C G A T G C A T A T C G A T C G A G T C G A C T A C T G A C G T
A C G T G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C

POL009.1_DCE_S_II/Jaspar

Match Rank:10
Score:0.60
Offset:6
Orientation:forward strand
Alignment:CGATTGGCTG--
------GCTGTG
 A G T C A T C G T G C A C G A T G C A T A T C G A T C G A G T C G A C T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G