Information for 3-TSTGGTTKCA (Motif 5)

C A G T A T C G G A C T C T A G C A T G A G C T A G C T C A G T A T G C C G T A
Reverse Opposite:
G C A T T A C G G T C A T C G A T C G A G T A C G A T C C T G A T A G C G T C A
p-value:1e-21
log p-value:-4.970e+01
Information Content per bp:1.536
Number of Target Sequences with motif100.0
Percentage of Target Sequences with motif11.40%
Number of Background Sequences with motif409.3
Percentage of Background Sequences with motif3.75%
Average Position of motif in Targets45.3 +/- 26.2bp
Average Position of motif in Background48.9 +/- 34.0bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:1
Score:0.85
Offset:-1
Orientation:reverse strand
Alignment:-TSTGGTTKCA
CTGTGGTTTN-
A C G T C A G T A T C G G A C T C T A G C A T G A G C T A G C T C A G T A T G C C G T A
G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:2
Score:0.84
Offset:-2
Orientation:reverse strand
Alignment:--TSTGGTTKCA
NNTGTGGTTT--
A C G T A C G T C A G T A T C G G A C T C T A G C A T G A G C T A G C T C A G T A T G C C G T A
A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.81
Offset:-2
Orientation:forward strand
Alignment:--TSTGGTTKCA
GCTGTGGTTT--
A C G T A C G T C A G T A T C G G A C T C T A G C A T G A G C T A G C T C A G T A T G C C G T A
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T A C G T

RUNX3/MA0684.1/Jaspar

Match Rank:4
Score:0.79
Offset:-2
Orientation:reverse strand
Alignment:--TSTGGTTKCA
TTTGCGGTTT--
A C G T A C G T C A G T A T C G G A C T C T A G C A T G A G C T A G C T C A G T A T G C C G T A
C G A T A G C T A C G T T A C G A G T C A T C G A C T G A C G T A G C T C G A T A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:5
Score:0.79
Offset:-3
Orientation:forward strand
Alignment:---TSTGGTTKCA
GTCTGTGGTTT--
A C G T A C G T A C G T C A G T A T C G G A C T C T A G C A T G A G C T A G C T C A G T A T G C C G T A
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:6
Score:0.79
Offset:-3
Orientation:reverse strand
Alignment:---TSTGGTTKCA
NNHTGTGGTTWN-
A C G T A C G T A C G T C A G T A T C G G A C T C T A G C A T G A G C T A G C T C A G T A T G C C G T A
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G A C G T

RUNX2/MA0511.2/Jaspar

Match Rank:7
Score:0.79
Offset:-1
Orientation:reverse strand
Alignment:-TSTGGTTKCA
TTGCGGTTT--
A C G T C A G T A T C G G A C T C T A G C A T G A G C T A G C T C A G T A T G C C G T A
A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T A C G T A C G T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.76
Offset:2
Orientation:reverse strand
Alignment:TSTGGTTKCA--
--TGGTTTCAGT
C A G T A T C G G A C T C T A G C A T G A G C T A G C T C A G T A T G C C G T A A C G T A C G T
A C G T A C G T G A C T C T A G T A C G C G A T G C A T A C G T T A G C T C G A A T C G C G A T

PB0034.1_Irf4_1/Jaspar

Match Rank:9
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:TSTGGTTKCA-----
TNTGGTTTCGATACN
C A G T A T C G G A C T C T A G C A T G A G C T A G C T C A G T A T G C C G T A A C G T A C G T A C G T A C G T A C G T
G C A T A C G T G A C T C T A G A T C G C G A T C G A T A C G T A G T C C T A G C T G A G C A T G C T A G A T C A C T G

PB0036.1_Irf6_1/Jaspar

Match Rank:10
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--TSTGGTTKCA-----
NNNTTGGTTTCGNTNNN
A C G T A C G T C A G T A T C G G A C T C T A G C A T G A G C T A G C T C A G T A T G C C G T A A C G T A C G T A C G T A C G T A C G T
G C T A G T A C G C A T A C G T A G C T C T A G A C T G A C G T G C A T A C G T A G T C C T A G C T G A G A C T G A T C G C T A C A T G