Information for 20-AGGAAAGGCCCCCGCC (Motif 40)

C G T A A C T G A C T G C G T A C G T A C G T A A C T G A C T G A G T C A G T C A G T C A G T C A G T C A C T G A G T C A G T C
Reverse Opposite:
A C T G A C T G A G T C A C T G A C T G A C T G A C T G A C T G A G T C A G T C A C G T A C G T A C G T A G T C A G T C A C G T
p-value:1e-4
log p-value:-1.063e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.46%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets51.8 +/- 22.3bp
Average Position of motif in Background71.2 +/- 18.2bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

REL/MA0101.1/Jaspar

Match Rank:1
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:AGGAAAGGCCCCCGCC
-GGAAANCCCC-----
 C G T A A C T G A C T G C G T A C G T A C G T A A C T G A C T G A G T C A G T C A G T C A G T C A G T C A C T G A G T C A G T C
A C G T A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C A C G T A C G T A C G T A C G T A C G T

MF0003.1_REL_class/Jaspar

Match Rank:2
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:AGGAAAGGCCCCCGCC
-GGAAATCCCC-----
 C G T A A C T G A C T G C G T A C G T A C G T A A C T G A C T G A G T C A G T C A G T C A G T C A G T C A C T G A G T C A G T C
A C G T C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C A C G T A C G T A C G T A C G T A C G T

RELA/MA0107.1/Jaspar

Match Rank:3
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:AGGAAAGGCCCCCGCC
-GGAAATTCCC-----
 C G T A A C T G A C T G C G T A C G T A C G T A A C T G A C T G A G T C A G T C A G T C A G T C A G T C A C T G A G T C A G T C
A C G T A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C A C G T A C G T A C G T A C G T A C G T

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.60
Offset:8
Orientation:reverse strand
Alignment:AGGAAAGGCCCCCGCC
--------CCCCCCCC
 C G T A A C T G A C T G C G T A C G T A C G T A A C T G A C T G A G T C A G T C A G T C A G T C A G T C A C T G A G T C A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C A T G C A G T C A G T C G A T C A G T C A G T C

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:5
Score:0.59
Offset:1
Orientation:forward strand
Alignment:AGGAAAGGCCCCCGCC
-GGAAATTCCC-----
 C G T A A C T G A C T G C G T A C G T A C G T A A C T G A C T G A G T C A G T C A G T C A G T C A G T C A C T G A G T C A G T C
A C G T A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C A C G T A C G T A C G T A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:6
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:AGGAAAGGCCCCCGCC--
----CAGGCCNNGGCCNN
 C G T A A C T G A C T G C G T A C G T A C G T A A C T G A C T G A G T C A G T C A G T C A G T C A G T C A C T G A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

Sp1(Zf)/Promoter/Homer

Match Rank:7
Score:0.56
Offset:7
Orientation:forward strand
Alignment:AGGAAAGGCCCCCGCC---
-------GGCCCCGCCCCC
 C G T A A C T G A C T G C G T A C G T A C G T A A C T G A C T G A G T C A G T C A G T C A G T C A G T C A C T G A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:8
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:AGGAAAGGCCCCCGCC
GGGAAATCCCCN----
 C G T A A C T G A C T G C G T A C G T A C G T A A C T G A C T G A G T C A G T C A G T C A G T C A G T C A C T G A G T C A G T C
C A T G C T A G C T A G C T G A G C T A C G T A A G C T G A T C G T A C G T A C G T A C G C A T A C G T A C G T A C G T A C G T

SP1/MA0079.3/Jaspar

Match Rank:9
Score:0.55
Offset:8
Orientation:forward strand
Alignment:AGGAAAGGCCCCCGCC---
--------GCCCCGCCCCC
 C G T A A C T G A C T G C G T A C G T A C G T A A C T G A C T G A G T C A G T C A G T C A G T C A G T C A C T G A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C G A T C A G T C A G T C C A T G A G T C A G T C A G T C G A T C A G T C

PB0039.1_Klf7_1/Jaspar

Match Rank:10
Score:0.55
Offset:5
Orientation:forward strand
Alignment:AGGAAAGGCCCCCGCC-----
-----TCGACCCCGCCCCTAT
 C G T A A C T G A C T G C G T A C G T A C G T A A C T G A C T G A G T C A G T C A G T C A G T C A G T C A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A C T A G T C C T A G T C G A G T A C G T A C T G A C G A T C C T A G A G T C A G T C A G T C G A T C G A C T G C T A C G A T