Information for 25-AKTATTATCTTCT (Motif 39)

C G T A A C T G A C G T C G T A A G C T A G C T C T G A C A G T A G T C G A C T A G C T A G T C A C G T
Reverse Opposite:
C G T A A C T G T C G A C T G A C T A G G C T A G A C T C T G A C T G A A C G T C G T A T G A C A C G T
p-value:1e-5
log p-value:-1.211e+01
Information Content per bp:1.721
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.57%
Number of Background Sequences with motif3.1
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets40.9 +/- 25.1bp
Average Position of motif in Background45.7 +/- 28.5bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.80
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Mecom/MA0029.1/Jaspar

Match Rank:1
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:AKTATTATCTTCT---
--TNTTATCTTATCTT
 C G T A A C T G A C G T C G T A A G C T A G C T C T G A C A G T A G T C G A C T A G C T A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T A C G A G C T C G A T C T G A A C G T A G T C A G C T A C G T C T G A A C G T T A G C G C A T G A C T

MF0010.1_Homeobox_class/Jaspar

Match Rank:2
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-AKTATTATCTTCT
AATTATT-------
 A C G T C G T A A C T G A C G T C G T A A G C T A G C T C T G A C A G T A G T C G A C T A G C T A G T C A C G T
G C T A G C T A G A C T G A C T C G T A G C A T C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0174.1_Sox30_2/Jaspar

Match Rank:3
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----AKTATTATCTTCT
NCGTATTATAATCNTA-
 A C G T A C G T A C G T A C G T C G T A A C T G A C G T C G T A A G C T A G C T C T G A C A G T A G T C G A C T A G C T A G T C A C G T
A T G C A G T C A C T G A C G T G T C A C G A T A G C T G T C A A C G T T C G A C G T A C A G T T G A C G C A T C A G T C T G A A C G T

PB0079.1_Sry_1/Jaspar

Match Rank:4
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----AKTATTATCTTCT
TATAATTATAATATTC-
 A C G T A C G T A C G T A C G T C G T A A C T G A C G T C G T A A G C T A G C T C T G A C A G T A G T C G A C T A G C T A G T C A C G T
A C G T G C T A C A G T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C T G A C G A T C A G T T G A C A C G T

Arid5a/MA0602.1/Jaspar

Match Rank:5
Score:0.60
Offset:-6
Orientation:reverse strand
Alignment:------AKTATTATCTTCT
NNTNNCAATATTAG-----
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C G T C G T A A G C T A G C T C T G A C A G T A G T C G A C T A G C T A G T C A C G T
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G A C G T A C G T A C G T A C G T A C G T

PB0002.1_Arid5a_1/Jaspar

Match Rank:6
Score:0.60
Offset:-6
Orientation:reverse strand
Alignment:------AKTATTATCTTCT
NNTNNCAATATTAG-----
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C G T C G T A A G C T A G C T C T G A C A G T A G T C G A C T A G C T A G T C A C G T
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G A C G T A C G T A C G T A C G T A C G T

PB0064.1_Sox14_1/Jaspar

Match Rank:7
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----AKTATTATCTTCT
GCTAATTATAATTATC-
 A C G T A C G T A C G T A C G T C G T A A C T G A C G T C G T A A G C T A G C T C T G A C A G T A G T C G A C T A G C T A G T C A C G T
C A T G G A T C G A C T G C T A G C T A C G A T C G A T C T G A G A C T C G T A G C T A C G A T C G A T C G T A C A G T G T A C A C G T

PB0069.1_Sox21_1/Jaspar

Match Rank:8
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----AKTATTATCTTCT
NNTAATTATAATNANN-
 A C G T A C G T A C G T A C G T C G T A A C T G A C G T C G T A A G C T A G C T C T G A C A G T A G T C G A C T A G C T A G T C A C G T
G T A C G C A T G C A T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C G A T C G T A C G T A C G T A A C G T

GATA3/MA0037.2/Jaspar

Match Rank:9
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:AKTATTATCTTCT
--TCTTATCT---
 C G T A A C T G A C G T C G T A A G C T A G C T C T G A C A G T A G T C G A C T A G C T A G T C A C G T
A C G T A C G T A G C T A G T C A C G T A C G T C G T A A C G T A G T C A C G T A C G T A C G T A C G T

PB0023.1_Gata6_1/Jaspar

Match Rank:10
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--AKTATTATCTTCT--
NNANTCTTATCTNNNNN
 A C G T A C G T C G T A A C T G A C G T C G T A A G C T A G C T C T G A C A G T A G T C G A C T A G C T A G T C A C G T A C G T A C G T
A G T C C G T A G C T A G A C T A C G T A T G C C G A T C G A T C T G A C G A T G T A C C G A T G T A C A C G T G C T A C A G T G C T A