Information for 11-GCAGACCTCCTHCHGG (Motif 23)

A C T G A T G C C T G A A C T G G T C A G A T C A G T C C G A T A G T C A G T C A C G T G A C T A G T C G C T A A C T G A C T G
Reverse Opposite:
A G T C A G T C C G A T C T A G C A G T G T C A A C T G T C A G G C T A T C A G C T A G A C G T G T A C A G C T A T C G A G T C
p-value:1e-11
log p-value:-2.627e+01
Information Content per bp:1.774
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif0.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets61.3 +/- 17.2bp
Average Position of motif in Background40.0 +/- 5.6bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GCAGACCTCCTHCHGG
CCAGACRSVB------
 A C T G A T G C C T G A A C T G G T C A G A T C A G T C C G A T A G T C A G T C A C G T G A C T A G T C G C T A A C T G A C T G
T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C A C G T A C G T A C G T A C G T A C G T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:2
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---GCAGACCTCCTHCHGG
ATGCCAGACN---------
 A C G T A C G T A C G T A C T G A T G C C T G A A C T G G T C A G A T C A G T C C G A T A G T C A G T C A C G T G A C T A G T C G C T A A C T G A C T G
C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:3
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:GCAGACCTCCTHCHGG
BCAGACWA--------
 A C T G A T G C C T G A A C T G G T C A G A T C A G T C C G A T A G T C A G T C A C G T G A C T A G T C G C T A A C T G A C T G
A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:GCAGACCTCCTHCHGG
CCAGACAG--------
 A C T G A T G C C T G A A C T G G T C A G A T C A G T C C G A T A G T C A G T C A C G T G A C T A G T C G C T A A C T G A C T G
A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NRL/MA0842.1/Jaspar

Match Rank:5
Score:0.49
Offset:-5
Orientation:forward strand
Alignment:-----GCAGACCTCCTHCHGG
AATTTGCTGAC----------
 A C G T A C G T A C G T A C G T A C G T A C T G A T G C C T G A A C T G G T C A G A T C A G T C C G A T A G T C A G T C A C G T G A C T A G T C G C T A A C T G A C T G
C G T A C G T A G C A T G C A T G A C T T C A G G T A C G C A T C A T G G C T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:6
Score:0.48
Offset:-2
Orientation:forward strand
Alignment:--GCAGACCTCCTHCHGG
CATAAGACCACCATTAC-
 A C G T A C G T A C T G A T G C C T G A A C T G G T C A G A T C A G T C C G A T A G T C A G T C A C G T G A C T A G T C G C T A A C T G A C T G
A G T C C G A T C A G T C T G A T G C A A C T G G T C A G A T C A T G C G T C A G A T C G A T C G C T A A C G T C A G T C T G A A G C T A C G T

ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer

Match Rank:7
Score:0.47
Offset:4
Orientation:reverse strand
Alignment:GCAGACCTCCTHCHGG
----ACTTCCTGNT--
 A C T G A T G C C T G A A C T G G T C A G A T C A G T C C G A T A G T C A G T C A C G T G A C T A G T C G C T A A C T G A C T G
A C G T A C G T A C G T A C G T C T G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G A C T G G C A T A C G T A C G T

POL002.1_INR/Jaspar

Match Rank:8
Score:0.47
Offset:0
Orientation:forward strand
Alignment:GCAGACCTCCTHCHGG
TCAGTCTT--------
 A C T G A T G C C T G A A C T G G T C A G A T C A G T C C G A T A G T C A G T C A C G T G A C T A G T C G C T A A C T G A C T G
C A G T A G T C C G T A A T C G G A C T G A T C A G C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.46
Offset:-4
Orientation:forward strand
Alignment:----GCAGACCTCCTHCHGG
GTCWGCTGTYYCTCT-----
 A C G T A C G T A C G T A C G T A C T G A T G C C T G A A C T G G T C A G A T C A G T C C G A T A G T C A G T C A C G T G A C T A G T C G C T A A C T G A C T G
C T A G A C G T A G T C C G T A A C T G A G T C G C A T A C T G G C A T A G T C G A C T G A T C G C A T A G T C A G C T A C G T A C G T A C G T A C G T A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:10
Score:0.46
Offset:-1
Orientation:reverse strand
Alignment:-GCAGACCTCCTHCHGG
NGAAGC-----------
 A C G T A C T G A T G C C T G A A C T G G T C A G A T C A G T C C G A T A G T C A G T C A C G T G A C T A G T C G C T A A C T G A C T G
T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T