Information for 17-GGGCGGGCTCACC (Motif 21)

A C T G A C T G A C T G A G T C C T A G A C T G C T A G A G T C A G C T A G T C C T G A A T G C T A G C
Reverse Opposite:
A T C G A T C G A G C T A C T G C T G A A C T G A G T C A G T C A G T C A C T G A G T C G T A C A G T C
p-value:1e-11
log p-value:-2.627e+01
Information Content per bp:1.820
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets42.3 +/- 22.8bp
Average Position of motif in Background35.0 +/- 17.9bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL011.1_XCPE1/Jaspar

Match Rank:1
Score:0.71
Offset:0
Orientation:forward strand
Alignment:GGGCGGGCTCACC
GGGCGGGACC---
 A C T G A C T G A C T G A G T C C T A G A C T G C T A G A G T C A G C T A G T C C T G A A T G C T A G C
A C T G A T C G A C T G A G T C A C T G A C T G C T A G C G T A A T G C G T A C A C G T A C G T A C G T

PB0039.1_Klf7_1/Jaspar

Match Rank:2
Score:0.71
Offset:-4
Orientation:reverse strand
Alignment:----GGGCGGGCTCACC
NNAGGGGCGGGGTNNA-
 A C G T A C G T A C G T A C G T A C T G A C T G A C T G A G T C C T A G A C T G C T A G A G T C A G C T A G T C C T G A A T G C T A G C
G C T A C G A T C T G A C T A G C T A G A C T G A C T G G A T C C A T G A C T G C A T G C A T G A G C T G A T C T C A G C G T A A C G T

Sp1(Zf)/Promoter/Homer

Match Rank:3
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--GGGCGGGCTCACC
GGGGGCGGGGCC---
 A C G T A C G T A C T G A C T G A C T G A G T C C T A G A C T G C T A G A G T C A G C T A G T C C T G A A T G C T A G C
T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C A C G T A C G T A C G T

POL003.1_GC-box/Jaspar

Match Rank:4
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---GGGCGGGCTCACC
AGGGGGCGGGGCTG--
 A C G T A C G T A C G T A C T G A C T G A C T G A G T C C T A G A C T G C T A G A G T C A G C T A G T C C T G A A T G C T A G C
C G T A C T A G C A T G T C A G A C T G C T A G G T A C C T A G A C T G C T A G C A T G A G T C A G C T C A T G A C G T A C G T

SP2/MA0516.1/Jaspar

Match Rank:5
Score:0.67
Offset:-6
Orientation:reverse strand
Alignment:------GGGCGGGCTCACC
GGGNGGGGGCGGGGC----
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G A G T C C T A G A C T G C T A G A G T C A G C T A G T C C T G A A T G C T A G C
T A C G T A C G T A C G T C G A C T A G C T A G C T A G C T A G A C T G G T A C C T A G A T C G C T A G T C A G T A G C A C G T A C G T A C G T A C G T

POL006.1_BREu/Jaspar

Match Rank:6
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:GGGCGGGCTCACC
-GGCGCGCT----
 A C T G A C T G A C T G A G T C C T A G A C T G C T A G A G T C A G C T A G T C C T G A A T G C T A G C
A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T A C G T A C G T A C G T A C G T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GGGCGGGCTCACC
GCTCGGSCTC---
 A C T G A C T G A C T G A G T C C T A G A C T G C T A G A G T C A G C T A G T C C T G A A T G C T A G C
C T A G G T A C A C G T A T G C C T A G A C T G T A C G A G T C A C G T A G T C A C G T A C G T A C G T

PB0076.1_Sp4_1/Jaspar

Match Rank:8
Score:0.65
Offset:-7
Orientation:reverse strand
Alignment:-------GGGCGGGCTCACC
NNNAAGGGGGCGGGNNN---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G A G T C C T A G A C T G C T A G A G T C A G C T A G T C C T G A A T G C T A G C
T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C A C G T A C G T A C G T

PB0110.1_Bcl6b_2/Jaspar

Match Rank:9
Score:0.65
Offset:-6
Orientation:reverse strand
Alignment:------GGGCGGGCTCACC
NNTNAGGGGCGGNNNN---
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G A G T C C T A G A C T G C T A G A G T C A G C T A G T C C T G A A T G C T A G C
A C G T C G A T C A G T C A G T G C T A T A C G T A C G A C T G C A T G G A T C C T A G C T A G T A C G T A C G T C G A C A G T A C G T A C G T A C G T

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:10
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----GGGCGGGCTCACC
NNVDGGGYGGGGCYN--
 A C G T A C G T A C G T A C G T A C T G A C T G A C T G A G T C C T A G A C T G C T A G A G T C A G C T A G T C C T G A A T G C T A G C
T A C G T G A C T C A G C T G A A C T G A C T G A C T G A G C T A C T G A C T G C T A G A C T G A G T C A G T C C T G A A C G T A C G T