Information for 3-GACTACAWCTCCC (Motif 2)

T C A G G T C A A G T C A C G T T C G A A G T C C G T A G C A T A T G C A G C T A G T C A G T C A G T C
Reverse Opposite:
A C T G C T A G C T A G C T G A T A C G C G T A G C A T A C T G A C G T C G T A A C T G A C G T A G T C
p-value:1e-24
log p-value:-5.726e+01
Information Content per bp:1.793
Number of Target Sequences with motif30.0
Percentage of Target Sequences with motif3.42%
Number of Background Sequences with motif24.4
Percentage of Background Sequences with motif0.22%
Average Position of motif in Targets49.6 +/- 20.6bp
Average Position of motif in Background44.8 +/- 31.5bp
Strand Bias (log2 ratio + to - strand density)1.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GFY(?)/Promoter/Homer

Match Rank:1
Score:0.89
Offset:1
Orientation:forward strand
Alignment:GACTACAWCTCCC
-ACTACAATTCCC
 T C A G G T C A A G T C A C G T T C G A A G T C C G T A G C A T A T G C A G C T A G T C A G T C A G T C
A C G T T G C A T A G C G A C T T G C A T G A C T G C A C G T A A G C T A G C T A G T C A G T C G T A C

Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer

Match Rank:2
Score:0.85
Offset:0
Orientation:forward strand
Alignment:GACTACAWCTCCC-------
RACTACAACTCCCAGVAKGC
 T C A G G T C A A G T C A C G T T C G A A G T C C G T A G C A T A T G C A G C T A G T C A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T C A G C G T A A G T C A G C T C G T A A G T C C T G A C G T A A G T C G C A T A G T C A G T C A G T C C T G A A C T G T G C A T C G A C A T G A T C G G A T C

GFY-Staf(?,Zf)/Promoter/Homer

Match Rank:3
Score:0.80
Offset:0
Orientation:forward strand
Alignment:GACTACAWCTCCC-------
AACTACAATTCCCAGAATGC
 T C A G G T C A A G T C A C G T T C G A A G T C C G T A G C A T A T G C A G C T A G T C A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T C G A C G T A A G T C A G C T C G T A A G T C T C G A G C T A G A C T C G A T A G T C A G T C A G T C C T G A T C A G T G C A T C G A C A G T A T C G A G T C

PB0117.1_Eomes_2/Jaspar

Match Rank:4
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GACTACAWCTCCC-
NNGGCGACACCTCNNN
 A C G T A C G T T C A G G T C A A G T C A C G T T C G A A G T C C G T A G C A T A T G C A G C T A G T C A G T C A G T C A C G T
A T C G T C G A T C A G A T C G T G A C C T A G G C T A A G T C C T G A A T G C A G T C G A C T G A T C A G T C T A C G A G T C

MZF1/MA0056.1/Jaspar

Match Rank:5
Score:0.53
Offset:9
Orientation:reverse strand
Alignment:GACTACAWCTCCC--
---------TCCCCA
 T C A G G T C A A G T C A C G T T C G A A G T C C G T A G C A T A T G C A G C T A G T C A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A G T C G T A C A G T C G T A C T C G A

PB0203.1_Zfp691_2/Jaspar

Match Rank:6
Score:0.52
Offset:-5
Orientation:forward strand
Alignment:-----GACTACAWCTCCC
TACGAGACTCCTCTAAC-
 A C G T A C G T A C G T A C G T A C G T T C A G G T C A A G T C A C G T T C G A A G T C C G T A G C A T A T G C A G C T A G T C A G T C A G T C
C A G T C T G A A T G C A C T G C G T A C A T G C T G A A T G C A C G T A G T C T G A C A G C T G A T C C G A T T G C A G T C A T A G C A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:7
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--GACTACAWCTCCC
NWAACCACADNN---
 A C G T A C G T T C A G G T C A A G T C A C G T T C G A A G T C C G T A G C A T A T G C A G C T A G T C A G T C A G T C
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C A C G T A C G T A C G T

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:8
Score:0.49
Offset:2
Orientation:forward strand
Alignment:GACTACAWCTCCC----
--NRGCCCCRCCCHBNN
 T C A G G T C A A G T C A C G T T C G A A G T C C G T A G C A T A T G C A G C T A G T C A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T G A C T T C A G C T A G A G T C A G T C G T A C A G T C C T G A A G T C A G T C A G T C G A C T A G T C A C T G A T G C

PB0140.1_Irf6_2/Jaspar

Match Rank:9
Score:0.49
Offset:4
Orientation:forward strand
Alignment:GACTACAWCTCCC------
----ACCACTCTCGGTCAC
 T C A G G T C A A G T C A C G T T C G A A G T C C G T A G C A T A T G C A G C T A G T C A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G C A A G T C A G T C G C T A G T A C C A G T A T G C A G C T A G T C C T A G T C A G C A G T G A T C C T G A T A G C

KLF5/MA0599.1/Jaspar

Match Rank:10
Score:0.49
Offset:4
Orientation:forward strand
Alignment:GACTACAWCTCCC-
----GCCCCGCCCC
 T C A G G T C A A G T C A C G T T C G A A G T C C G T A G C A T A T G C A G C T A G T C A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C T G A G T C A G T C G T A C A G T C C T A G A G T C A G T C A G T C G A T C