Information for 10-CTGTGTGTAACCA (Motif 10)

A G T C C G A T A T C G A C G T A T C G A C G T C A T G C A G T G T C A C G T A A G T C A G T C C T G A
Reverse Opposite:
A G C T C T A G A C T G C G A T A C G T G C T A G A T C C G T A T A G C C G T A A T G C C G T A A C T G
p-value:1e-15
log p-value:-3.561e+01
Information Content per bp:1.796
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.03%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets44.9 +/- 28.3bp
Average Position of motif in Background50.1 +/- 17.5bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:1
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CTGTGTGTAACCA
CTGTCTGTCACCT
 A G T C C G A T A T C G A C G T A T C G A C G T C A T G C A G T G T C A C G T A A G T C A G T C C T G A
T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T

PB0159.1_Rfx4_2/Jaspar

Match Rank:2
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:CTGTGTGTAACCA-----
---NNNGTAACTANGNNA
 A G T C C G A T A T C G A C G T A T C G A C G T C A T G C A G T G T C A C G T A A G T C A G T C C T G A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C A T C G A C T G G A C T G T C A C G T A G T A C A G C T G C T A C A T G A T C G T A C G C A G T C G T A

POL009.1_DCE_S_II/Jaspar

Match Rank:3
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CTGTGTGTAACCA
GCTGTG--------
 A C G T A G T C C G A T A T C G A C G T A T C G A C G T C A T G C A G T G T C A C G T A A G T C A G T C C T G A
T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CTGTGTGTAACCA
-TGTCTGDCACCT
 A G T C C G A T A T C G A C G T A T C G A C G T C A T G C A G T G T C A C G T A A G T C A G T C C T G A
A C G T G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T

PB0158.1_Rfx3_2/Jaspar

Match Rank:5
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CTGTGTGTAACCA---------
NNTNGNNGTAACCAAGNNNNAGN
 A C G T A G T C C G A T A T C G A C G T A T C G A C G T C A T G C A G T G T C A C G T A A G T C A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T A G C G C A T A G C T A G C T A C T G A G C T A C T G C A T G G A C T G T C A G C T A T A G C A G T C C G T A C G T A T A C G A T C G T A C G C G A T T A G C T G C A C T A G A C G T

SOX10/MA0442.1/Jaspar

Match Rank:6
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CTGTGTGTAACCA
CTTTGT-------
 A G T C C G A T A T C G A C G T A T C G A C G T C A T G C A G T G T C A C G T A A G T C A G T C C T G A
A G T C C G A T A C G T A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

HMBOX1/MA0895.1/Jaspar

Match Rank:7
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:CTGTGTGTAACCA--
-----GTTAACTAGN
 A G T C C G A T A T C G A C G T A T C G A C G T C A T G C A G T G T C A C G T A A G T C A G T C C T G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T C G C A G T G C A T C G T A G C T A T A G C G A C T G C T A T C A G A C G T

DMRT3/MA0610.1/Jaspar

Match Rank:8
Score:0.56
Offset:3
Orientation:forward strand
Alignment:CTGTGTGTAACCA-
---AATGTATCAAT
 A G T C C G A T A T C G A C G T A T C G A C G T C A T G C A G T G T C A C G T A A G T C A G T C C T G A A C G T
A C G T A C G T A C G T G T C A C G T A C G A T A C T G A C G T C G T A C G A T A G T C G T C A C G T A A C G T

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:9
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:CTGTGTGTAACCA--
---TATGTAAACANG
 A G T C C G A T A T C G A C G T A T C G A C G T C A T G C A G T G T C A C G T A A G T C A G T C C T G A A C G T A C G T
A C G T A C G T A C G T G C A T T C G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C T G A T A C G

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.53
Offset:0
Orientation:forward strand
Alignment:CTGTGTGTAACCA
CTGTCTGG-----
 A G T C C G A T A T C G A C G T A T C G A C G T C A T G C A G T G T C A C G T A A G T C A G T C C T G A
A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T A C G T A C G T