Information for 4-CCTCCAGACCCCCTGG (Motif 8)

A G T C A G T C A C G T A G T C A G T C C G T A A C T G C G T A T A G C A T G C G T A C A G T C G T A C A G C T A C T G T A C G
Reverse Opposite:
A G T C A G T C T C G A A C T G A C T G A C T G A T C G A C T G A C G T A G T C C G A T A C T G A C T G C G T A C T A G A C T G
p-value:1e-13
log p-value:-3.197e+01
Information Content per bp:1.818
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.84%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets48.0 +/- 32.6bp
Average Position of motif in Background56.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:1
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CCTCCAGACCCCCTGG
ATGCCAGACN------
 A G T C A G T C A C G T A G T C A G T C C G T A A C T G C G T A T A G C A T G C G T A C A G T C G T A C A G C T A C T G T A C G
C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C A C G T A C G T A C G T A C G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:CCTCCAGACCCCCTGG
---CCAGACRSVB---
 A G T C A G T C A C G T A G T C A G T C C G T A A C T G C G T A T A G C A T G C G T A C A G T C G T A C A G C T A C T G T A C G
A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C A C G T A C G T A C G T

PB0025.1_Glis2_1/Jaspar

Match Rank:3
Score:0.54
Offset:2
Orientation:forward strand
Alignment:CCTCCAGACCCCCTGG--
--TATCGACCCCCCACAG
 A G T C A G T C A C G T A G T C A G T C C G T A A C T G C G T A T A G C A T G C G T A C A G T C G T A C A G C T A C T G T A C G A C G T A C G T
A C G T A C G T G A C T G C T A G C A T T A G C A C T G T G C A A G T C A G T C G A T C G A T C G A T C G A T C T G C A A G T C C T G A C A T G

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:4
Score:0.53
Offset:1
Orientation:forward strand
Alignment:CCTCCAGACCCCCTGG--
-CATAAGACCACCATTAC
 A G T C A G T C A C G T A G T C A G T C C G T A A C T G C G T A T A G C A T G C G T A C A G T C G T A C A G C T A C T G T A C G A C G T A C G T
A C G T A G T C C G A T C A G T C T G A T G C A A C T G G T C A G A T C A T G C G T C A G A T C G A T C G C T A A C G T C A G T C T G A A G C T

ZIC4/MA0751.1/Jaspar

Match Rank:5
Score:0.52
Offset:6
Orientation:forward strand
Alignment:CCTCCAGACCCCCTGG-----
------GACCCCCCGCTGTGC
 A G T C A G T C A C G T A G T C A G T C C G T A A C T G C G T A T A G C A T G C G T A C A G T C G T A C A G C T A C T G T A C G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C T G T C G A G T A C G T A C G T A C G T A C G T A C G A T C C T A G A G T C C A G T C T A G G A C T A C T G G T A C

PB0057.1_Rxra_1/Jaspar

Match Rank:6
Score:0.52
Offset:0
Orientation:forward strand
Alignment:CCTCCAGACCCCCTGG-
TGTCGTGACCCCTTAAT
 A G T C A G T C A C G T A G T C A G T C C G T A A C T G C G T A T A G C A T G C G T A C A G T C G T A C A G C T A C T G T A C G A C G T
C A G T A T C G G A C T A G T C C A T G A G C T T C A G G T C A G T A C G T A C A G T C A G T C C G A T G A C T T C G A G T C A A G C T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:CCTCCAGACCCCCTGG
---CCAGACAG-----
 A G T C A G T C A C G T A G T C A G T C C G T A A C T G C G T A T A G C A T G C G T A C A G T C G T A C A G C T A C T G T A C G
A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T A C G T A C G T

ZIC1/MA0696.1/Jaspar

Match Rank:8
Score:0.52
Offset:6
Orientation:forward strand
Alignment:CCTCCAGACCCCCTGG----
------GACCCCCCGCTGTG
 A G T C A G T C A C G T A G T C A G T C C G T A A C T G C G T A T A G C A T G C G T A C A G T C G T A C A G C T A C T G T A C G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C T G T C G A G T A C G T A C G T A C A G T C G T A C G A T C T C A G A G T C A C G T T C A G G A C T A C T G

GLIS2/MA0736.1/Jaspar

Match Rank:9
Score:0.52
Offset:6
Orientation:forward strand
Alignment:CCTCCAGACCCCCTGG----
------GACCCCCCGCGAAG
 A G T C A G T C A C G T A G T C A G T C C G T A A C T G C G T A T A G C A T G C G T A C A G T C G T A C A G C T A C T G T A C G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C T G T C G A A G T C G T A C G A T C G T A C G T A C G A T C C T A G A G T C C T A G C T G A G T C A A T C G

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-CCTCCAGACCCCCTGG
NGNTCTAGAACCNGV--
 A C G T A G T C A G T C A C G T A G T C A G T C C G T A A C T G C G T A T A G C A T G C G T A C A G T C G T A C A G C T A C T G T A C G
C T G A T C A G G C T A A G C T A G T C G A C T C T G A C T A G T G C A C T G A A G T C G T A C G A T C A C T G T C G A A C G T A C G T