Information for 18-AAAGTTGCCTGATGAA (Motif 35)

C G T A C G T A C G T A A C T G A C G T A C G T A C T G A G T C A G T C A C G T A C T G C G T A A C G T A C T G C G T A C G T A
Reverse Opposite:
A C G T A C G T A G T C C G T A A C G T A G T C C G T A A C T G A C T G A G T C C G T A C G T A A G T C A C G T A C G T A C G T
p-value:1e-5
log p-value:-1.242e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.42%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets54.7 +/- 4.8bp
Average Position of motif in Background49.5 +/- 23.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:AAAGTTGCCTGATGAA
NNACTTGCCTT-----
 C G T A C G T A C G T A A C T G A C G T A C G T A C T G A G T C A G T C A C G T A C T G C G T A A C G T A C T G C G T A C G T A
T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T A C G T A C G T A C G T A C G T A C G T

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:2
Score:0.55
Offset:8
Orientation:reverse strand
Alignment:AAAGTTGCCTGATGAA--
--------ATGATGCAAT
 C G T A C G T A C G T A A C T G A C G T A C G T A C T G A G T C A G T C A C G T A C T G C G T A A C G T A C T G C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A A G C T A C T G C G T A A G C T C A T G G A T C T G C A C G T A A G C T

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:3
Score:0.53
Offset:8
Orientation:forward strand
Alignment:AAAGTTGCCTGATGAA--
--------MTGATGCAAT
 C G T A C G T A C G T A A C T G A C G T A C G T A C T G A G T C A G T C A C G T A C T G C G T A A C G T A C T G C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A A G C T C A T G C G T A A G C T A C T G G A T C G T C A C G T A A G C T

PB0146.1_Mafk_2/Jaspar

Match Rank:4
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---AAAGTTGCCTGATGAA
GAAAAAATTGCAAGG----
 A C G T A C G T A C G T C G T A C G T A C G T A A C T G A C G T A C G T A C T G A G T C A G T C A C G T A C T G C G T A A C G T A C T G C G T A C G T A
T C A G G T C A T C G A C T G A C T G A G C T A G C T A C A G T A G C T C A T G A G T C T G C A G T C A A T C G T C A G A C G T A C G T A C G T A C G T

PBX1/MA0070.1/Jaspar

Match Rank:5
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:AAAGTTGCCTGATGAA
---TTTGATTGATGN-
 C G T A C G T A C G T A A C T G A C G T A C G T A C T G A G T C A G T C A C G T A C T G C G T A A C G T A C T G C G T A C G T A
A C G T A C G T A C G T C G A T G C A T C A G T A C T G G T C A C G A T A C G T A C T G C G T A A C G T A C T G C A T G A C G T

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:6
Score:0.51
Offset:3
Orientation:forward strand
Alignment:AAAGTTGCCTGATGAA--
---ATTGCCTCAGGCAAT
 C G T A C G T A C G T A A C T G A C G T A C G T A C T G A G T C A G T C A C G T A C T G C G T A A C G T A C T G C G T A C G T A A C G T A C G T
A C G T A C G T A C G T C G T A C A G T G C A T T C A G G A T C G T A C A C G T A T G C G T C A C T A G C A T G G T A C C T G A G T C A G C A T

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:7
Score:0.49
Offset:5
Orientation:reverse strand
Alignment:AAAGTTGCCTGATGAA
-----TGATTGATGA-
 C G T A C G T A C G T A A C T G A C G T A C G T A C T G A G T C A G T C A C G T A C T G C G T A A C G T A C T G C G T A C G T A
A C G T A C G T A C G T A C G T A C G T C G A T T C A G G T C A A G C T C G A T C T A G C G T A A C G T C A T G C T G A A C G T

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:8
Score:0.49
Offset:3
Orientation:reverse strand
Alignment:AAAGTTGCCTGATGAA
---ATTTCCTGTN---
 C G T A C G T A C G T A A C T G A C G T A C G T A C T G A G T C A G T C A C G T A C T G C G T A A C G T A C T G C G T A C G T A
A C G T A C G T A C G T C T G A A G C T A C G T A C G T A G T C A G T C A C G T A C T G G A C T A C G T A C G T A C G T A C G T

RBPJ:Ebox(?,bHLH)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:9
Score:0.48
Offset:-3
Orientation:forward strand
Alignment:---AAAGTTGCCTGATGAA
GGGRAARRGRMCAGMTG--
 A C G T A C G T A C G T C G T A C G T A C G T A A C T G A C G T A C G T A C T G A G T C A G T C A C G T A C T G C G T A A C G T A C T G C G T A C G T A
C A T G A C T G C T A G T C G A T C G A T C G A T C G A T C A G T C A G T C A G T G A C T G A C C G T A A C T G T G C A C G A T A C T G A C G T A C G T

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:10
Score:0.48
Offset:3
Orientation:reverse strand
Alignment:AAAGTTGCCTGATGAA--
---NTNGCCTCAGGCNNN
 C G T A C G T A C G T A A C T G A C G T A C G T A C T G A G T C A G T C A C G T A C T G C G T A A C G T A C T G C G T A C G T A A C G T A C G T
A C G T A C G T A C G T G C T A C A G T G A C T A T C G A G T C A G T C A G C T T A G C T C G A T C A G A C T G T A G C C G T A C G T A C G A T