Information for 2-RSCTTCCMACAGK (Motif 3)

C T A G A T C G A G T C A C G T A C G T A G T C A G T C G T C A C G T A G T A C C G T A A C T G A C T G
Reverse Opposite:
G T A C G T A C A C G T A C T G A C G T A C G T A C T G A C T G C G T A C G T A A C T G A T G C A G T C
p-value:1e-14
log p-value:-3.331e+01
Information Content per bp:1.875
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.98%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets46.0 +/- 32.1bp
Average Position of motif in Background21.9 +/- 6.3bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.64
Offset:1
Orientation:forward strand
Alignment:RSCTTCCMACAGK
-GCTTCC------
 C T A G A T C G A G T C A C G T A C G T A G T C A G T C G T C A C G T A G T A C C G T A A C T G A C T G
A C G T A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T A C G T A C G T A C G T A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:2
Score:0.64
Offset:1
Orientation:forward strand
Alignment:RSCTTCCMACAGK
-HTTTCCCASG--
 C T A G A T C G A G T C A C G T A C G T A G T C A G T C G T C A C G T A G T A C C G T A A C T G A C T G
A C G T G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G A C G T A C G T

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:RSCTTCCMACAGK
---TTGCAACATN
 C T A G A T C G A G T C A C G T A C G T A G T C A G T C G T C A C G T A G T A C C G T A A C T G A C T G
A C G T A C G T A C G T C A G T A C G T C T A G A G T C G T C A C G T A G A T C G C T A A G C T G A T C

THAP1/MA0597.1/Jaspar

Match Rank:4
Score:0.61
Offset:2
Orientation:forward strand
Alignment:RSCTTCCMACAGK
--CTGCCCGCA--
 C T A G A T C G A G T C A C G T A C G T A G T C A G T C G T C A C G T A G T A C C G T A A C T G A C T G
A C G T A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:5
Score:0.58
Offset:7
Orientation:reverse strand
Alignment:RSCTTCCMACAGK
-------CACAGN
 C T A G A T C G A G T C A C G T A C G T A G T C A G T C G T C A C G T A G T A C C G T A A C T G A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:6
Score:0.56
Offset:1
Orientation:forward strand
Alignment:RSCTTCCMACAGK
-ATTTCCAAGAA-
 C T A G A T C G A G T C A C G T A C G T A G T C A G T C G T C A C G T A G T A C C G T A A C T G A C T G
A C G T C T G A A G C T A C G T A G C T A G T C G A T C G T C A C T G A A C T G G C T A C T G A A C G T

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:7
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:RSCTTCCMACAGK
-SCTGTCARCACC
 C T A G A T C G A G T C A C G T A C G T A G T C A G T C G T C A C G T A G T A C C G T A A C T G A C T G
A C G T T A G C G A T C C G A T C A T G G C A T A G T C G T C A C T G A A G T C C T G A T A G C A G T C

SCRT2/MA0744.1/Jaspar

Match Rank:8
Score:0.55
Offset:3
Orientation:forward strand
Alignment:RSCTTCCMACAGK---
---ATGCAACAGGTGG
 C T A G A T C G A G T C A C G T A C G T A G T C A G T C G T C A C G T A G T A C C G T A A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T T C G A G C A T A C T G G T A C T G C A C G T A G T A C G T C A T C A G A T C G G C A T C A T G A T C G

STAT3/MA0144.2/Jaspar

Match Rank:9
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:RSCTTCCMACAGK
--TTTCCCAGAAN
 C T A G A T C G A G T C A C G T A C G T A G T C A G T C G T C A C G T A G T A C C G T A A C T G A C T G
A C G T A C G T G A C T A C G T A C G T G A T C A G T C G T A C C T G A C T A G T G C A C G T A T C A G

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:RSCTTCCMACAGK
-NYTTCCCGCC--
 C T A G A T C G A G T C A C G T A C G T A G T C A G T C G T C A C G T A G T A C C G T A A C T G A C T G
A C G T T A G C A G C T G A C T A G C T A T G C T G A C T A G C C A T G A T G C A T G C A C G T A C G T