Information for 7-GATAGTTTGA (Motif 28)

A C T G C G T A A C G T C G T A A C T G A C G T A C G T A C G T A T C G C G T A
Reverse Opposite:
A C G T A T G C C G T A C G T A C G T A A G T C C G A T C G T A A C G T A G T C
p-value:1e-8
log p-value:-2.037e+01
Information Content per bp:1.936
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.84%
Number of Background Sequences with motif7.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets44.2 +/- 21.2bp
Average Position of motif in Background66.2 +/- 24.3bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox5/MA0087.1/Jaspar

Match Rank:1
Score:0.67
Offset:1
Orientation:forward strand
Alignment:GATAGTTTGA
-ATTGTTA--
 A C T G C G T A A C G T C G T A A C T G A C G T A C G T A C G T A T C G C G T A
A C G T C G T A A C G T A C G T C T A G A G C T G A C T C G A T A C G T A C G T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:GATAGTTTGA--
--TGGTTTCAGT
 A C T G C G T A A C G T C G T A A C T G A C G T A C G T A C G T A T C G C G T A A C G T A C G T
A C G T A C G T G A C T C T A G T A C G C G A T G C A T A C G T T A G C T C G A A T C G C G A T

SRY/MA0084.1/Jaspar

Match Rank:3
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GATAGTTTGA
-ATTGTTTAN
 A C T G C G T A A C G T C G T A A C T G A C G T A C G T A C G T A T C G C G T A
A C G T G C T A A G C T A C G T C T A G C G A T C G A T G C A T G C T A G T A C

SOX9/MA0077.1/Jaspar

Match Rank:4
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GATAGTTTGA
CCATTGTTC--
 A C G T A C T G C G T A A C G T C G T A A C T G A C G T A C G T A C G T A T C G C G T A
A G T C G A T C G C T A C A G T C G A T T A C G C G A T G C A T G A T C A C G T A C G T

Myb/MA0100.2/Jaspar

Match Rank:5
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GATAGTTTGA
TGGCAGTTGN-
 A C G T A C T G C G T A A C G T C G T A A C T G A C G T A C G T A C G T A T C G C G T A
C G A T A C T G C T A G A G T C C G T A A C T G A G C T A C G T C T A G T C A G A C G T

MF0011.1_HMG_class/Jaspar

Match Rank:6
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GATAGTTTGA
-ATTGTT---
 A C T G C G T A A C G T C G T A A C T G A C G T A C G T A C G T A T C G C G T A
A C G T G C T A A C G T G A C T C T A G G C A T A G C T A C G T A C G T A C G T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:7
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:GATAGTTTGA-----
-----TTTGAAACCG
 A C T G C G T A A C G T C G T A A C T G A C G T A C G T A C G T A T C G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G

Foxd3/MA0041.1/Jaspar

Match Rank:8
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GATAGTTTGA--
GAATGTTTGTTT
 A C T G C G T A A C G T C G T A A C T G A C G T A C G T A C G T A T C G C G T A A C G T A C G T
C T A G G C T A G C T A G A C T C T A G A C G T C G A T C A G T C T A G G A C T A C G T A G C T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:9
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GATAGTTTGA
CCATTGTTYB-
 A C G T A C T G C G T A A C G T C G T A A C T G A C G T A C G T A C G T A T C G C G T A
A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G A C G T

PBX1/MA0070.1/Jaspar

Match Rank:10
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GATAGTTTGA---
-TTTGATTGATGN
 A C T G C G T A A C G T C G T A A C T G A C G T A C G T A C G T A T C G C G T A A C G T A C G T A C G T
A C G T C G A T G C A T C A G T A C T G G T C A C G A T A C G T A C T G C G T A A C G T A C T G C A T G