Information for 10-GDCAGDGGACAGATGC (Motif 20)

A C T G C A T G A T G C C G T A A C T G C A G T A C T G A C T G C T G A A G T C C G T A A C T G G T C A A C G T A C T G A T G C
Reverse Opposite:
A T C G A G T C T G C A A C G T A G T C A C G T A C T G A G C T A G T C A G T C G T C A A G T C A C G T A T C G G A T C A G T C
p-value:1e-11
log p-value:-2.567e+01
Information Content per bp:1.822
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.98%
Number of Background Sequences with motif6.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets44.7 +/- 21.6bp
Average Position of motif in Background61.3 +/- 16.5bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Myod1/MA0499.1/Jaspar

Match Rank:1
Score:0.66
Offset:4
Orientation:reverse strand
Alignment:GDCAGDGGACAGATGC-
----NGNGACAGCTGCN
 A C T G C A T G A T G C C G T A A C T G C A G T A C T G A C T G C T G A A G T C C G T A A C T G G T C A A C G T A C T G A T G C A C G T
A C G T A C G T A C G T A C G T T C G A T C A G A T C G T C A G T C G A A G T C C G T A A C T G T A G C C G A T A C T G A T G C C G T A

Myog/MA0500.1/Jaspar

Match Rank:2
Score:0.64
Offset:7
Orientation:forward strand
Alignment:GDCAGDGGACAGATGC--
-------GACAGCTGCAG
 A C T G C A T G A T G C C G T A A C T G C A G T A C T G A C T G C T G A A G T C C G T A A C T G G T C A A C G T A C T G A T G C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G T C G A A G T C C G T A A C T G T A G C A C G T A C T G T A G C C T G A T A C G

Tcf12/MA0521.1/Jaspar

Match Rank:3
Score:0.64
Offset:7
Orientation:forward strand
Alignment:GDCAGDGGACAGATGC--
-------AACAGCTGCAG
 A C T G C A T G A T G C C G T A A C T G C A G T A C T G A C T G C T G A A G T C C G T A A C T G G T C A A C G T A C T G A T G C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G T A G C C G T A T A C G

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:4
Score:0.63
Offset:5
Orientation:forward strand
Alignment:GDCAGDGGACAGATGC-
-----NNVVCAGCTGBN
 A C T G C A T G A T G C C G T A A C T G C A G T A C T G A C T G C T G A A G T C C G T A A C T G G T C A A C G T A C T G A T G C A C G T
A C G T A C G T A C G T A C G T A C G T C T A G A G T C T A C G T A C G T G A C C G T A A C T G T A G C G C A T C A T G A T G C A G C T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:5
Score:0.63
Offset:7
Orientation:reverse strand
Alignment:GDCAGDGGACAGATGC-
-------AACAGATGGT
 A C T G C A T G A T G C C G T A A C T G C A G T A C T G A C T G C T G A A G T C C G T A A C T G G T C A A C G T A C T G A T G C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A T C G A A G T C C G T A A C T G G T C A G C A T A C T G A C T G A G C T

PB0118.1_Esrra_2/Jaspar

Match Rank:6
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GDCAGDGGACAGATGC
GGCGAGGGGTCAAGGGC
 A C G T A C T G C A T G A T G C C G T A A C T G C A G T A C T G A C T G C T G A A G T C C G T A A C T G G T C A A C G T A C T G A T G C
T A C G C A T G A T G C A C T G G C T A T A C G T C A G C A T G A C T G C G A T A G T C C T G A G C T A C T A G A T C G A T C G G T A C

RBPJ:Ebox(?,bHLH)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:7
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GDCAGDGGACAGATGC
GGGRAARRGRMCAGMTG-
 A C G T A C G T A C T G C A T G A T G C C G T A A C T G C A G T A C T G A C T G C T G A A G T C C G T A A C T G G T C A A C G T A C T G A T G C
C A T G A C T G C T A G T C G A T C G A T C G A T C G A T C A G T C A G T C A G T G A C T G A C C G T A A C T G T G C A C G A T A C T G A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:8
Score:0.62
Offset:7
Orientation:reverse strand
Alignment:GDCAGDGGACAGATGC-
-------AACAGATGGC
 A C T G C A T G A T G C C G T A A C T G C A G T A C T G A C T G C T G A A G T C C G T A A C T G G T C A A C G T A C T G A T G C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:9
Score:0.62
Offset:5
Orientation:forward strand
Alignment:GDCAGDGGACAGATGC-
-----VNAVCAGCTGGC
 A C T G C A T G A T G C C G T A A C T G C A G T A C T G A C T G C T G A A G T C C G T A A C T G G T C A A C G T A C T G A T G C A C G T
A C G T A C G T A C G T A C G T A C G T T C A G A C G T T C G A T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G T C

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:10
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---GDCAGDGGACAGATGC
TAGGGCAAAGGTCA-----
 A C G T A C G T A C G T A C T G C A T G A T G C C G T A A C T G C A G T A C T G A C T G C T G A A G T C C G T A A C T G G T C A A C G T A C T G A T G C
A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A A C G T A C G T A C G T A C G T A C G T