Information for 21-GGCTAACTATGTTCTT (Motif 39)

A T C G C T A G T A G C A G C T C G T A C G T A A G T C A G C T C G T A A C G T A T C G A C G T A C G T A G T C A G C T A C G T
Reverse Opposite:
C G T A C T G A C T A G C G T A C G T A A T G C C G T A A C G T C T G A A C T G A C G T A C G T T C G A A T C G A G T C A T G C
p-value:1e-5
log p-value:-1.332e+01
Information Content per bp:1.909
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.52%
Number of Background Sequences with motif5.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets55.0 +/- 26.3bp
Average Position of motif in Background67.5 +/- 11.8bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HMBOX1/MA0895.1/Jaspar

Match Rank:1
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GGCTAACTATGTTCTT
-GTTAACTAGN-----
 A T C G C T A G T A G C A G C T C G T A C G T A A G T C A G C T C G T A A C G T A T C G A C G T A C G T A G T C A G C T A C G T
A C G T A T C G C A G T G C A T C G T A G C T A T A G C G A C T G C T A T C A G A C G T A C G T A C G T A C G T A C G T A C G T

Sox1/MA0870.1/Jaspar

Match Rank:2
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:GGCTAACTATGTTCTT---
----AACAATGNTATTGTT
 A T C G C T A G T A G C A G C T C G T A C G T A A G T C A G C T C G T A A C G T A T C G A C G T A C G T A G T C A G C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A C T G A A G T C C T G A G T C A A C G T T A C G A G C T G C A T C G T A A C G T C A G T A C T G C G A T A C G T

PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer

Match Rank:3
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:GGCTAACTATGTTCTT
-GAACADWATGTTCTT
 A T C G C T A G T A G C A G C T C G T A C G T A A G T C A G C T C G T A A C G T A T C G A C G T A C G T A G T C A G C T A C G T
A C G T C T A G C G T A C G T A A G T C C G T A C A G T C G T A G T C A C G A T A C T G A C G T G C A T A G T C G A C T G C A T

NR3C2/MA0727.1/Jaspar

Match Rank:4
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GGCTAACTATGTTCTT
GGGAACACAATGTTCCC
 A C G T A T C G C T A G T A G C A G C T C G T A C G T A A G T C A G C T C G T A A C G T A T C G A C G T A C G T A G T C A G C T A C G T
C A T G C T A G C A T G C G T A T G C A A T G C C T G A G A T C C G T A C T G A G A C T A T C G G A C T G C A T G A T C A G T C G T A C

PB0159.1_Rfx4_2/Jaspar

Match Rank:5
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GGCTAACTATGTTCTT
NNNGTAACTANGNNA--
 A C G T A T C G C T A G T A G C A G C T C G T A C G T A A G T C A G C T C G T A A C G T A T C G A C G T A C G T A G T C A G C T A C G T
A C G T A T G C A T C G A C T G G A C T G T C A C G T A G T A C A G C T G C T A C A T G A T C G T A C G C A G T C G T A A C G T A C G T

PH0168.1_Hnf1b/Jaspar

Match Rank:6
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---GGCTAACTATGTTCTT
AGCTGTTAACTAGCCGT--
 A C G T A C G T A C G T A T C G C T A G T A G C A G C T C G T A C G T A A G T C A G C T C G T A A C G T A T C G A C G T A C G T A G T C A G C T A C G T
C G T A A C T G A G T C A C G T C T A G G C A T G A C T C G T A G C T A A G T C A G C T C G T A T C A G A G T C G A T C A T C G A G C T A C G T A C G T

NR3C1/MA0113.3/Jaspar

Match Rank:7
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-GGCTAACTATGTTCTT
GGGTACATAATGTTCCC
 A C G T A T C G C T A G T A G C A G C T C G T A C G T A A G T C A G C T C G T A A C G T A T C G A C G T A C G T A G T C A G C T A C G T
C T A G C T A G C T A G C G A T C G T A A T G C C T G A G A C T C G T A C T G A G A C T A T C G A C G T G C A T G A T C G A T C G T A C

Tcf7/MA0769.1/Jaspar

Match Rank:8
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:GGCTAACTATGTTCTT-
-----CCTTTGATCTTT
 A T C G C T A G T A G C A G C T C G T A C G T A A G T C A G C T C G T A A C G T A T C G A C G T A C G T A G T C A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G A T A G C T G C A T A T C G T G C A G C A T T A G C G C A T G A C T G A C T

Ar/MA0007.3/Jaspar

Match Rank:9
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-GGCTAACTATGTTCTT
NGGTACACNGTGTTCCC
 A C G T A T C G C T A G T A G C A G C T C G T A C G T A A G T C A G C T C G T A A C G T A T C G A C G T A C G T A G T C A G C T A C G T
C T A G C T A G C T A G G C A T C G T A T A G C C T G A A G T C A T G C T C A G A G C T A T C G A C G T C G A T G A T C G A T C G A T C

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:10
Score:0.52
Offset:5
Orientation:forward strand
Alignment:GGCTAACTATGTTCTT
-----YCTTTGTTCC-
 A T C G C T A G T A G C A G C T C G T A C G T A A G T C A G C T C G T A A C G T A T C G A C G T A C G T A G T C A G C T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C A C G T