Information for 18-GGCCAATGCCCCGACC (Motif 32)

A C T G A C T G A G T C A G T C C G T A G T C A C G A T A T C G A G T C A G T C A T G C A G T C A T C G C G T A A G T C A G T C
Reverse Opposite:
A C T G A C T G A C G T A T G C A C T G A T C G C T A G A C T G A T G C C G T A A C G T A C G T A C T G A C T G A G T C A G T C
p-value:1e-8
log p-value:-1.970e+01
Information Content per bp:1.924
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.52%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets54.2 +/- 21.0bp
Average Position of motif in Background64.4 +/- 8.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:1
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GGCCAATGCCCCGACC
NAGGTCANTGACCT----
 A C G T A C G T A C T G A C T G A G T C A G T C C G T A G T C A C G A T A T C G A G T C A G T C A T G C A G T C A T C G C G T A A G T C A G T C
T C A G T C G A C T A G C A T G A C G T A T G C T C G A G A C T A G C T T A C G T G C A G T A C G T A C A G C T A C G T A C G T A C G T A C G T

Sp1(Zf)/Promoter/Homer

Match Rank:2
Score:0.56
Offset:6
Orientation:forward strand
Alignment:GGCCAATGCCCCGACC--
------GGCCCCGCCCCC
 A C T G A C T G A G T C A G T C C G T A G T C A C G A T A T C G A G T C A G T C A T G C A G T C A T C G C G T A A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C

KLF5/MA0599.1/Jaspar

Match Rank:3
Score:0.55
Offset:7
Orientation:forward strand
Alignment:GGCCAATGCCCCGACC-
-------GCCCCGCCCC
 A C T G A C T G A G T C A G T C C G T A G T C A C G A T A T C G A G T C A G T C A T G C A G T C A T C G C G T A A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A G T C G T A C A G T C C T A G A G T C A G T C A G T C G A T C

Klf4/MA0039.2/Jaspar

Match Rank:4
Score:0.54
Offset:7
Orientation:reverse strand
Alignment:GGCCAATGCCCCGACC-
-------GCCCCACCCA
 A C T G A C T G A G T C A G T C C G T A G T C A C G A T A T C G A G T C A G T C A T G C A G T C A T C G C G T A A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G T G A C G A T C T G A C G T A C C T G A T A G C A G T C A G T C G C T A

NFY(CCAAT)/Promoter/Homer

Match Rank:5
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GGCCAATGCCCCGACC
AGCCAATCGG------
 A C T G A C T G A G T C A G T C C G T A G T C A C G A T A T C G A G T C A G T C A T G C A G T C A T C G C G T A A G T C A G T C
T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.54
Offset:8
Orientation:reverse strand
Alignment:GGCCAATGCCCCGACC
--------CCCCCCCC
 A C T G A C T G A G T C A G T C C G T A G T C A C G A T A T C G A G T C A G T C A T G C A G T C A T C G C G T A A G T C A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C A T G C A G T C A G T C G A T C A G T C A G T C

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:7
Score:0.52
Offset:7
Orientation:reverse strand
Alignment:GGCCAATGCCCCGACC-
-------GCCMCRCCCH
 A C T G A C T G A G T C A G T C C G T A G T C A C G A T A T C G A G T C A G T C A T G C A G T C A T C G C G T A A G T C A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G G T A C G A T C G T C A G A T C C T G A A G T C A G T C A G T C G C A T

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:8
Score:0.52
Offset:5
Orientation:forward strand
Alignment:GGCCAATGCCCCGACC----
-----NRGCCCCRCCCHBNN
 A C T G A C T G A G T C A G T C C G T A G T C A C G A T A T C G A G T C A G T C A T G C A G T C A T C G C G T A A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A C T T C A G C T A G A G T C A G T C G T A C A G T C C T G A A G T C A G T C A G T C G A C T A G T C A C T G A T G C

NFIC/MA0161.1/Jaspar

Match Rank:9
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:GGCCAATGCCCCGACC
TGCCAA----------
 A C T G A C T G A G T C A G T C C G T A G T C A C G A T A T C G A G T C A G T C A T G C A G T C A T C G C G T A A G T C A G T C
G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POL004.1_CCAAT-box/Jaspar

Match Rank:10
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---GGCCAATGCCCCGACC
ACTAGCCAATCA-------
 A C G T A C G T A C G T A C T G A C T G A G T C A G T C C G T A G T C A C G A T A T C G A G T C A G T C A T G C A G T C A T C G C G T A A G T C A G T C
G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T