Information for 15-RGACKCAGACTKCCCR (Motif 28)

C T A G A T C G G T C A G T A C A C G T A G T C T C G A A C T G C G T A A G T C A C G T A C G T A G T C A G T C A G T C T C G A
Reverse Opposite:
A G C T C T A G A C T G A C T G G T A C C G T A A C T G G A C T T A G C A C G T C T A G G T C A A C T G A C G T A T G C A G C T
p-value:1e-8
log p-value:-2.068e+01
Information Content per bp:1.741
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.78%
Number of Background Sequences with motif6.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets58.3 +/- 13.9bp
Average Position of motif in Background72.2 +/- 8.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THAP1/MA0597.1/Jaspar

Match Rank:1
Score:0.61
Offset:9
Orientation:forward strand
Alignment:RGACKCAGACTKCCCR--
---------CTGCCCGCA
 C T A G A T C G G T C A G T A C A C G T A G T C T C G A A C T G C G T A A G T C A C G T A C G T A G T C A G T C A G T C T C G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A

GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer

Match Rank:2
Score:0.59
Offset:8
Orientation:reverse strand
Alignment:RGACKCAGACTKCCCR--
--------ACTTCCGGTN
 C T A G A T C G G T C A G T A C A C G T A G T C T C G A A C T G C G T A A G T C A C G T A C G T A G T C A G T C A G T C T C G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G T C G C A T G C A T A T G C A G T C A C T G A T C G A G C T A G C T

ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer

Match Rank:3
Score:0.59
Offset:7
Orientation:reverse strand
Alignment:RGACKCAGACTKCCCR-
-------CACTTCCTGT
 C T A G A T C G G T C A G T A C A C G T A G T C T C G A A C T G C G T A A G T C A C G T A C G T A G T C A G T C A G T C T C G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C C T G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G A G C T

ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer

Match Rank:4
Score:0.59
Offset:8
Orientation:reverse strand
Alignment:RGACKCAGACTKCCCR--
--------ACTTCCGGTT
 C T A G A T C G G T C A G T A C A C G T A G T C T C G A A C T G C G T A A G T C A C G T A C G T A G T C A G T C A G T C T C G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G T C G C A T C G A T A G T C A G T C A C T G A T C G G A C T A G C T

EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer

Match Rank:5
Score:0.58
Offset:8
Orientation:reverse strand
Alignment:RGACKCAGACTKCCCR--
--------ACTTCCTGBT
 C T A G A T C G G T C A G T A C A C G T A G T C T C G A A C T G C G T A A G T C A C G T A C G T A G T C A G T C A G T C T C G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A A G T C A C G T A C G T A G T C A G T C A C G T A T C G A T C G G C A T

POL008.1_DCE_S_I/Jaspar

Match Rank:6
Score:0.58
Offset:8
Orientation:forward strand
Alignment:RGACKCAGACTKCCCR
--------GCTTCC--
 C T A G A T C G G T C A G T A C A C G T A G T C T C G A A C T G C G T A A G T C A C G T A C G T A G T C A G T C A G T C T C G A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T

ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer

Match Rank:7
Score:0.58
Offset:8
Orientation:reverse strand
Alignment:RGACKCAGACTKCCCR--
--------ACTTCCTGNT
 C T A G A T C G G T C A G T A C A C G T A G T C T C G A A C T G C G T A A G T C A C G T A C G T A G T C A G T C A G T C T C G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G A C T G G C A T

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:8
Score:0.58
Offset:7
Orientation:reverse strand
Alignment:RGACKCAGACTKCCCR-
-------CACTTCCTGT
 C T A G A T C G G T C A G T A C A C G T A G T C T C G A A C T G C G T A A G T C A C G T A C G T A G T C A G T C A G T C T C G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C T C G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G A G C T

ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer

Match Rank:9
Score:0.57
Offset:8
Orientation:reverse strand
Alignment:RGACKCAGACTKCCCR--
--------ACTTCCTBGT
 C T A G A T C G G T C A G T A C A C G T A G T C T C G A A C T G C G T A A G T C A C G T A C G T A G T C A G T C A G T C T C G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G T C A G C T C G A T A G T C A T G C A C G T A T G C T C A G C G A T

ETS(ETS)/Promoter/Homer

Match Rank:10
Score:0.57
Offset:8
Orientation:reverse strand
Alignment:RGACKCAGACTKCCCR--
--------ACTTCCGGTT
 C T A G A T C G G T C A G T A C A C G T A G T C T C G A A C T G C G T A A G T C A C G T A C G T A G T C A G T C A G T C T C G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A A G T C C G A T C A G T A G T C A G T C C A T G A T C G A G C T A C G T